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Report for CCDS5653.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5653.1 Public Homo sapiens 7 OCM2 24 110 108 CCDS HistoryNCBI Gene:4951Re-query CCDS DB by CCDS ID:5653.1Re-query CCDS DB by GeneID:4951See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5653.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257627.5 ENSP00000257627.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257627.5Link to Ensembl Protein Viewer:ENSP00000257627.4Re-query CCDS DB by Nucleotide ID:ENST00000257627Re-query CCDS DB by Protein ID:ENSP00000257627
Original member Current member NCBI NM_006188.4 NP_006179.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006188.4Link to Protein Sequence:NP_006179.2Re-query CCDS DB by Nucleotide ID:NM_006188Re-query CCDS DB by Protein ID:NP_006179Link to BLAST:NP_006179.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006179.2 109 P0CE71 109 100% 0 0

Chromosomal Locations for CCDS 5653.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 97984958 97984983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97987047 97987156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97988416 97988548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97990044 97990104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (330 nt):
ATGAGCATCACGGACGTGCTCAGTGCTGATGACATTGCAGCAGCGCTCCAGGAATGCCAAGACCCAGACA
CTTTTGAACCCCAAAAATTCTTCCAGACGTCAGGCCTCTCCAAGATGTCAGCCAGTCAGGTGAAGGATGT
TTTCCGGTTCATAGACAACGACCAGAGCGGGTATCTGGATGAAGAAGAGCTTAAGTTTTTCCTCCAGAAG
TTTGAGAGTGGTGCCAGAGAACTGACCGAGTCAGAAACCAAGTCCTTGATGGCTGCGGCGGATAATGATG
GAGATGGGAAAATTGGAGCAGAGGAATTCCAGGAAATGGTGCATTCTTAA

Translation (109 aa):
MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQK
FESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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