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Report for CCDS5656.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5656.1 Public Homo sapiens 7 BRI3 24 110 108 CCDS HistoryNCBI Gene:25798Re-query CCDS DB by CCDS ID:5656.1Re-query CCDS DB by GeneID:25798See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5656.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297290.4 ENSP00000297290.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297290.4Link to Ensembl Protein Viewer:ENSP00000297290.3Re-query CCDS DB by Nucleotide ID:ENST00000297290Re-query CCDS DB by Protein ID:ENSP00000297290
Original member Current member NCBI NM_015379.5 NP_056194.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015379.5Link to Protein Sequence:NP_056194.1Re-query CCDS DB by Nucleotide ID:NM_015379Re-query CCDS DB by Protein ID:NP_056194Link to BLAST:NP_056194.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056194.1 125 O95415-1 125 100% 0 0

Chromosomal Locations for CCDS 5656.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 98281796 98281937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98282351 98282453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98291111 98291243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGGACCACAAGCCGCTGCTGCAGGAGCGGCCGCCCGCCTACAACCTGGAGGCCGGCCAGGGCGACTACG
CGTGCGGCCCGCACGGCTACGGCGCCATCCCCGCCGCGCCCCCGCCGCCGCCCTACCCCTACCTCGTCAC
AGGGATACCCACCCACCATCCCAGGGTCTACAACATCCACAGCCGGACCGTCACCCGCTATCCTGCCAAC
TCTATCGTGGTCGTAGGAGGCTGTCCTGTCTGCAGGGTTGGGGTGCTGGAGGACTGCTTCACCTTCCTGG
GCATCTTCCTGGCCATCATCCTCTTCCCCTTTGGGTTCATTTGCTGTTTTGCCTTGAGGAAGCGACGATG
CCCCAACTGTGGAGCCACCTTCGCTTAA

Translation (125 aa):
MDHKPLLQERPPAYNLEAGQGDYACGPHGYGAIPAAPPPPPYPYLVTGIPTHHPRVYNIHSRTVTRYPAN
SIVVVGGCPVCRVGVLEDCFTFLGIFLAIILFPFGFICCFALRKRRCPNCGATFA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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