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Report for CCDS5665.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5665.1 Public Homo sapiens 7 ATP5MF 24 110 108 CCDS HistoryNCBI Gene:9551Re-query CCDS DB by CCDS ID:5665.1Re-query CCDS DB by GeneID:9551See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5665.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292475.8 ENSP00000292475.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292475.8Link to Ensembl Protein Viewer:ENSP00000292475.4Re-query CCDS DB by Nucleotide ID:ENST00000292475Re-query CCDS DB by Protein ID:ENSP00000292475
Original member Current member NCBI NM_004889.5 NP_004880.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004889.5Link to Protein Sequence:NP_004880.1Re-query CCDS DB by Nucleotide ID:NM_004889Re-query CCDS DB by Protein ID:NP_004880Link to BLAST:NP_004880.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004880.1 94 P56134-1 94 100% 0 0

Chromosomal Locations for CCDS 5665.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99458327 99458355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99459147 99459263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99460086 99460193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99466111 99466141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (285 nt):
ATGGCGTCAGTTGGTGAGTGTCCGGCCCCAGTACCAGTGAAGGACAAGAAACTTCTGGAGGTCAAACTGG
GGGAGCTGCCAAGCTGGATCTTGATGCGGGACTTCAGTCCTAGTGGCATTTTCGGAGCGTTTCAAAGAGG
TTACTACCGGTACTACAACAAGTACATCAATGTGAAGAAGGGGAGCATCTCGGGGATTACCATGGTGCTG
GCATGCTACGTGCTCTTTAGCTACTCCTTTTCCTACAAGCATCTCAAGCACGAGCGGCTCCGCAAATACC
ACTGA

Translation (94 aa):
MASVGECPAPVPVKDKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVL
ACYVLFSYSFSYKHLKHERLRKYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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