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Report for CCDS5719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5719.1 Public Homo sapiens 7 IFT22 24 110 108 CCDS HistoryNCBI Gene:64792Re-query CCDS DB by CCDS ID:5719.1Re-query CCDS DB by GeneID:64792See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315322.10 ENSP00000320359.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000315322.10Link to Ensembl Protein Viewer:ENSP00000320359.4Re-query CCDS DB by Nucleotide ID:ENST00000315322Re-query CCDS DB by Protein ID:ENSP00000320359
Original member Current member EBI ENST00000422177.5 ENSP00000392087.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000422177.5Link to Ensembl Protein Viewer:ENSP00000392087.1Re-query CCDS DB by Nucleotide ID:ENST00000422177Re-query CCDS DB by Protein ID:ENSP00000392087
Original member Current member NCBI NM_022777.4 NP_073614.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022777.4Link to Protein Sequence:NP_073614.1Re-query CCDS DB by Nucleotide ID:NM_022777Re-query CCDS DB by Protein ID:NP_073614Link to BLAST:NP_073614.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073614.1 185 Q9H7X7-1 185 100% 0 0

Chromosomal Locations for CCDS 5719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 101315134 101315282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101316340 101316542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101318124 101318213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101318956 101319032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101321671 101321709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGCTGAAAGCCAAGATCCTCTTCGTGGGGCCTTGCGAGAGTGGAAAAACTGTTTTGGCCAACTTTCTGA
CAGAATCTTCTGACATCACTGAATACAGCCCAACCCAAGGAGTGAGGATCCTAGAATTTGAGAACCCGCA
TGTTACCAGCAACAACAAAGGCACGGGCTGTGAATTCGAGCTATGGGACTGTGGTGGCGATGCTAAGTTT
GAGTCCTGCTGGCCGGCCCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGACATCCCAA
GCCACCGGAAGGAAATGGAGATGTGGTATTCCTGCTTTGTCCAACAGCCGTCCTTACAGGACACACAGTG
TATGCTAATTGCACACCACAAACCAGGCTCTGGAGATGATAAAGGAAGCCTGTCTTTGTCGCCACCCTTG
AACAAGCTGAAGCTGGTGCACTCAAACCTGGAAGATGACCCTGAGGAGATCCGGATGGAATTCATAAAGT
ATTTAAAAAGCATAATCAACTCCATGTCTGAGAGCAGAGACAGGGAGGAGATGTCAATTATGACCTAG

Translation (185 aa):
MLKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFELWDCGGDAKF
ESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKGSLSLSPPL
NKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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