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Report for CCDS5726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5726.1 Public Homo sapiens 7 FBXL13 24 110 108 CCDS HistoryNCBI Gene:222235Re-query CCDS DB by CCDS ID:5726.1Re-query CCDS DB by GeneID:222235See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5726.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313221.8 ENSP00000321927.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000313221.8Link to Ensembl Protein Viewer:ENSP00000321927.4Re-query CCDS DB by Nucleotide ID:ENST00000313221Re-query CCDS DB by Protein ID:ENSP00000321927
Original member Current member NCBI NM_145032.3 NP_659469.3 Accepted alive Link to Nucleotide Sequence:NM_145032.3Link to Protein Sequence:NP_659469.3Re-query CCDS DB by Nucleotide ID:NM_145032Re-query CCDS DB by Protein ID:NP_659469Link to BLAST:NP_659469.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659469.3 735 Q8NEE6-1 735 100% 0 0

Chromosomal Locations for CCDS 5726.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102813342 102813531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102822040 102822203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102832840 102832974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102854777 102854860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102877467 102877593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102878331 102878450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102883305 102883467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102883568 102883685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102884214 102884312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102913086 102913215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102926274 102926374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102931881 102931933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102963533 102963665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102968022 102968117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103025063 103025230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103027449 103027558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103028600 103028748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103029351 103029418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2208 nt):
ATGACTCCGGAATTGATGATAAAAGCCTGTAGCTTTTATACTGGACATTTAGTAAAGACTCATTTTTGCA
CTTGGAGAGACATAGCTCGTACAAATGAAAATGTCGTCCTGGCTGAAAAAATGAACAGAGCAGTGACATG
CTACAATTTCAGACTTCAAAAATCTGTATTTCATCACTGGCACTCTTATATGGAAGACCAGAAAGAAAAA
CTTAAAAATATTCTATTGCGGATACAACAGATCATCTATTGTCACAAGCTAACCATTATCCTAACAAAAT
GGCGGAATACAGCAAGACATAAGAGTAAAAAGAAAGAAGATGAGCTGATATTAAAACATGAACTTCAATT
GAAAAAATGGAAAAATAGGTTAATACTCAAAAGAGCTGCTGCAGAAGAATCCAATTTTCCTGAACGAAGT
TCTTCTGAAGTCTTTCTTGTAGATGAGACTCTAAAATGTGACATTTCACTGTTACCTGAAAGAGCAATAT
TACAGATTTTCTTCTACCTCAGTTTAAAAGATGTGATAATATGTGGTCAAGTTAATCATGCCTGGATGTT
GATGACACAACTAAACTCACTGTGGAATGCTATTGATTTTTCCTCAGTGAAAAATGTGATTCCAGATAAA
TATATAGTGTCTACTTTGCAAAGGTGGCGTTTAAATGTGCTGCGTTTGAATTTTCGTGGTTGTCTTCTCC
GACCCAAAACTTTCAGATCTGTCAGCCACTGTAGGAACTTGCAAGAGTTGAATGTCTCTGACTGCCCAAC
ATTCACAGATGAATCAATGAGACACATTTCTGAGGGCTGCCCGGGGGTCCTGTGTCTCAATCTGTCTAAC
ACAACTATCACCAACAGGACGATGCGACTCCTGCCGAGGCACTTCCACAACTTACAGAATCTTAGTTTGG
CTTATTGCAGACGGTTCACAGACAAAGGCTTACAGTACCTGAACTTGGGGAATGGATGCCACAAGCTCAT
CTATCTGGACCTCTCTGGCTGCACCCAGATTTCAGTCCAAGGCTTCAGGTACATTGCAAACAGCTGCACT
GGAATTATGCATCTTACCATTAATGACATGCCAACTCTGACGGACAACTGTGTAAAAGCTTTAGTTGAAA
AATGCTCTCGTATTACATCGCTGGTTTTCACTGGTGCACCGCATATCTCCGATTGTACTTTCAGAGCTCT
TTCTGCTTGTAAACTCAGAAAGATCCGATTTGAAGGAAATAAAAGGGTTACTGATGCATCCTTCAAATTT
ATAGACAAGAATTATCCAAATCTCAGTCACATTTATATGGCTGACTGCAAGGGAATAACAGACAGCAGCC
TCAGATCCCTTTCACCTTTGAAGCAACTGACTGTGTTGAATTTGGCAAATTGTGTAAGAATTGGTGATAT
GGGACTAAAGCAATTTCTTGATGGTCCTGCAAGCATGAGGATAAGAGAGCTAAATTTAAGCAACTGTGTG
CGGCTAAGTGATGCCTCTGTTATGAAACTATCTGAGCGCTGCCCTAATTTAAACTACTTGAGTTTACGAA
ATTGTGAACATTTGACTGCCCAAGGAATTGGATATATTGTAAACATCTTTTCCTTGGTATCAATAGATCT
CTCTGGAACAGACATCTCTAATGAGGGTTTGAATGTGCTTTCCAGACATAAAAAATTGAAGGAACTTTCT
GTATCTGAATGTTATAGAATCACTGATGATGGAATTCAGGCATTCTGCAAAAGCTCACTGATCTTGGAAC
ATTTGGATGTCTCTTATTGCTCCCAGCTGTCAGATATGATTATCAAAGCACTGGCCATTTACTGCATTAA
CCTCACATCTCTCAGCATTGCTGGCTGTCCAAAGATTACTGACTCAGCAATGGAGATGTTATCGGCAAAA
TGCCATTACCTGCACATTTTGGATATCTCTGGTTGTGTCTTGCTTACTGACCAAATCCTTGAGGACCTTC
AGATAGGCTGCAAACAACTCCGGATCCTTAAGATGCAATACTGCACAAATATTTCCAAGAAGGCAGCTCA
AAGAATGTCATCTAAAGTTCAGCAGCAGGAATACAACACTAATGACCCTCCACGTTGGTTTGGCTATGAT
AGGGAAGGAAACCCTGTTACAGAGCTTGACAACATAACATCATCTAAAGGAGCCTTAGAATTAACAGTGA
AAAAGTCAACATACAGCAGTGAAGACCAAGCAGCGTGA

Translation (735 aa):
MTPELMIKACSFYTGHLVKTHFCTWRDIARTNENVVLAEKMNRAVTCYNFRLQKSVFHHWHSYMEDQKEK
LKNILLRIQQIIYCHKLTIILTKWRNTARHKSKKKEDELILKHELQLKKWKNRLILKRAAAEESNFPERS
SSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFSSVKNVIPDK
YIVSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSN
TTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCT
GIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKF
IDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCV
RLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELS
VSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAK
CHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYD
REGNPVTELDNITSSKGALELTVKKSTYSSEDQAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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