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Report for CCDS5734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5734.1 Public Homo sapiens 7 ORC5 24 110 108 CCDS HistoryNCBI Gene:5001Re-query CCDS DB by CCDS ID:5734.1Re-query CCDS DB by GeneID:5001See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5734.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297431.9 ENSP00000297431.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297431.9Link to Ensembl Protein Viewer:ENSP00000297431.4Re-query CCDS DB by Nucleotide ID:ENST00000297431Re-query CCDS DB by Protein ID:ENSP00000297431
Original member Current member NCBI NM_002553.4 NP_002544.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002553.4Link to Protein Sequence:NP_002544.1Re-query CCDS DB by Nucleotide ID:NM_002553Re-query CCDS DB by Protein ID:NP_002544Link to BLAST:NP_002544.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002544.1 435 O43913-1 435 100% 0 0

Chromosomal Locations for CCDS 5734.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 104126848 104126893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104136781 104136893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104161072 104161182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104165235 104165282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104166772 104166884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104168473 104168525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104183943 104184033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104184123 104184171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104188251 104188381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104195143 104195254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104197725 104197799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104200758 104200958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104204142 104204234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104207833 104207904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1308 nt):
ATGCCCCACTTGGAAAACGTGGTGCTTTGTCGCGAGTCTCAAGTGTCCATCTTGCAGTCCTTGTTTGGAG
AGAGACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGCTAGTGGAAAGACCTATGTAAC
ACAAACGTTGTTGAAAACTTTAGAGCTCCCACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGG
CTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGAGGATGGATGTTCTACTGAAA
TAACCTGTGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAGTAACCACAGCTGAAAATCTTAAAGA
TCAGACTGTATATATTGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGAAGCAAATCTTTTGCCTGGA
TTTCTTAGATTACAAGAATTGGCTGACAGAAATGTGACTGTTCTCTTTCTCAGTGAAATTGTTTGGGAAA
AGTTTCGTCCAAATACTGGATGCTTTGAGCCGTTTGTCTTATATTTCCCTGATTACAGCATAGGCAACCT
TCAAAAGATCCTGTCCCATGATCATCCTCCAGAGTATTCAGCTGATTTCTATGCTGCCTACATTAACATT
CTTCTTGGAGTTTTCTACACTGTTTGTCGAGATTTGAAAGAGCTCAGACATCTGGCAGTACTTAATTTTC
CTAAATATTGTGAACCCGTGGTTAAAGGAGAAGCAAGTGAACGTGATACTCGCAAACTGTGGAGAAATAT
TGAACCTCATTTGAAGAAAGCTATGCAGACTGTTTATCTCAGGGAAATATCAAGTTCCCAGTGGGAAAAG
CTACAGAAAGATGACACAGATCCGGGGCAACTGAAAGGCCTCTCAGCGCATACTCATGTGGAACTTCCAT
ATTACTCTAAGTTCATTCTAATTGCTGCATACCTTGCTTCATACAATCCAGCAAGAACTGACAAGAGGTT
TTTTCTTAAGCATCATGGAAAAATCAAGAAAACCAACTTTCTAAAAAAACACGAAAAGACAAGCAATCAT
CTCCTTGGGCCAAAACCATTTCCACTAGACAGATTATTAGCAATATTATATAGTATCGTGGACAGCAGAG
TTGCTCCAACAGCAAATATTTTTTCCCAGATTACCTCTCTAGTGACCCTTCAGCTGTTAACCCTGGTTGG
CCATGACGATCAGCTTGATGGACCAAAATACAAATGCACAGTGTCTCTAGACTTCATCAGAGCTATTGCA
AGGACGGTGAACTTTGACATAATAAAATACTTGTATGATTTCTTGTGA

Translation (435 aa):
MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLR
LLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTVYIVLDKAEYLRDMEANLLPG
FLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFPDYSIGNLQKILSHDHPPEYSADFYAAYINI
LLGVFYTVCRDLKELRHLAVLNFPKYCEPVVKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEK
LQKDDTDPGQLKGLSAHTHVELPYYSKFILIAAYLASYNPARTDKRFFLKHHGKIKKTNFLKKHEKTSNH
LLGPKPFPLDRLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDDQLDGPKYKCTVSLDFIRAIA
RTVNFDIIKYLYDFL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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