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Report for CCDS57763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57763.1 Public Mus musculus X Renbp 23 108 98 CCDS HistoryNCBI Gene:19703Re-query CCDS DB by CCDS ID:57763.1Re-query CCDS DB by GeneID:19703See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57763.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114379.7 ENSMUSP00000110020.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114379.7Link to Ensembl Protein Viewer:ENSMUSP00000110020.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114379Re-query CCDS DB by Protein ID:ENSMUSP00000110020
Original member NCBI NM_001164704.1 NP_001158176.1 Updated not alive Link to Nucleotide Sequence:NM_001164704.1Link to Protein Sequence:NP_001158176.1Re-query CCDS DB by Nucleotide ID:NM_001164704Re-query CCDS DB by Protein ID:NP_001158176
Current member NCBI NM_001164704.2 NP_001158176.1 Accepted alive Link to Nucleotide Sequence:NM_001164704.2Link to Protein Sequence:NP_001158176.1Re-query CCDS DB by Nucleotide ID:NM_001164704Re-query CCDS DB by Protein ID:NP_001158176Link to BLAST:NP_001158176.1

Chromosomal Locations for CCDS 57763.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 73922139 73922263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73922351 73922438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73926216 73926347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73927813 73927988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73928279 73928360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73929116 73929340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73929681 73929853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930005 73930080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930229 73930262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930408 73930517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930714 73930743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGATGGACCTAGGACTCCTAATGTTACAGGACATGGAGAAGGAACGGGAGACACTGCAGGTCTGGAAGA
AGCGTGTGGAACAAGAGCTTGATCGTGTGATCGCTTTCTGGATGGAGCATTCCCATGACCAGGAACACGG
GGGCTTCTTCACATGTCTTGGCCGTGATGGGAAGGTATGGATGTATTGTCGCTTATACCGCAGTTTTGAG
CGCTTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAGCAGGTGGTGAATTTTTGCTGCGTTATGCCCGGG
TGGCACCACCTGGCAAGAAATGTGCTTTTGTGCTGACTCGGGATGGCCGGCCAGTGAAGGTGCAGCGGAC
CATTTTCAGCGAGTGCTTCTACACCATGGCCATGAATGAACTGTGGAAAGTAACGGGGGAAGTGCGTTAT
CAGAGTGAAGCCATAGAGATGATGGATCAGATCATCCACTGGGTACGGGAGGACCCGGCTGGGTTGGGCC
GGCCTCAGCTCTCAGGGGCACTGGCCACAGAGCCCATGGCAGTGCCCATGATGCTGCTCAGCCTGGTGGA
GCAGCTTGGAGAAGAAGATGAGGAGCTGACCAACATGTATGCAGAACTAGGGGACTGGTGTGTCCACAGG
ATTCTTCAGCATGTCCAGAGGGATGGACAAGTTGTACTGGAGAATGTATCAGAGGATGGAAAAGAGCTTC
CTGGTTGCCTTGGAAGACATCAGAACCCAGGCCACACACTGGAAGCTGGCTGGTTTCTGCTCCAGTATGC
CCTCAGGAAAGGTGACCCCAAACTTCGAATGCACATCATTGACAAGTTTCTCTTATTGCCTTTCCACTCT
GGATGGGACCCTGAACATGGAGGCCTCTTCTACTTCCAGGATGCGGATGGTCTCTGCCCTACCCAGCTGG
AATGGAACATGAAGCTGTGGTGGCCACACAGTGAAGCCATGATTGCCTTCCTCATGGGTTATAGTGACAG
TGGGGACCCTGCCTTGCTGCATCTCTTCTACAAGGTGGCTGAGTACACCTTCCGCCAGTTTCGTGATCCT
GAGTATGGGGAATGGTTTGGCTACCTGAACCAAGAGGGAAAGGTGGCCCTCACCATCAAGGGAGGTCCTT
TTAAAGGCTGCTTCCATGTGCCGCGGTGCCTGGCCATGTGCGAGCAGATTCTAGGAGCCCTACTCCAACG
CCTTGAGCCCGCCCCCCTCGACTCCTCGCCCGCTGTCTCTACCCATGAAGGCTCGAAATAA

Translation (416 aa):
MMDLGLLMLQDMEKERETLQVWKKRVEQELDRVIAFWMEHSHDQEHGGFFTCLGRDGKVWMYCRLYRSFE
RFRRVELLDAARAGGEFLLRYARVAPPGKKCAFVLTRDGRPVKVQRTIFSECFYTMAMNELWKVTGEVRY
QSEAIEMMDQIIHWVREDPAGLGRPQLSGALATEPMAVPMMLLSLVEQLGEEDEELTNMYAELGDWCVHR
ILQHVQRDGQVVLENVSEDGKELPGCLGRHQNPGHTLEAGWFLLQYALRKGDPKLRMHIIDKFLLLPFHS
GWDPEHGGLFYFQDADGLCPTQLEWNMKLWWPHSEAMIAFLMGYSDSGDPALLHLFYKVAEYTFRQFRDP
EYGEWFGYLNQEGKVALTIKGGPFKGCFHVPRCLAMCEQILGALLQRLEPAPLDSSPAVSTHEGSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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