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Report for CCDS58086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58086.1 Public Homo sapiens 10 TMEM254 24 110 108 CCDS HistoryNCBI Gene:80195Re-query CCDS DB by CCDS ID:58086.1Re-query CCDS DB by GeneID:80195See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58086.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372274.5 ENSP00000361348.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372274.5Link to Ensembl Protein Viewer:ENSP00000361348.1Re-query CCDS DB by Nucleotide ID:ENST00000372274Re-query CCDS DB by Protein ID:ENSP00000361348
Original member Current member EBI ENST00000372277.7 ENSP00000361351.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372277.7Link to Ensembl Protein Viewer:ENSP00000361351.3Re-query CCDS DB by Nucleotide ID:ENST00000372277Re-query CCDS DB by Protein ID:ENSP00000361351
Original member Current member NCBI NM_001270370.2 NP_001257299.1 Accepted alive Link to Nucleotide Sequence:NM_001270370.2Link to Protein Sequence:NP_001257299.1Re-query CCDS DB by Nucleotide ID:NM_001270370Re-query CCDS DB by Protein ID:NP_001257299Link to BLAST:NP_001257299.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257299.1 103 Q8TBM7-3 103 100% 0 0

Chromosomal Locations for CCDS 58086.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80078700 80078786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80081841 80081944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80082145 80082204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80086231 80086258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80090380 80090412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGGCTACGGCAGCCGGCGCGACCTACTTTCAGCGAGGCAGTCTGTTCTGGTTCACAGTCATCACCCTCA
GCTTTGGCTACTACACATGGGTTGTCTTCTGGCCTCAGAGTATCCCTTATCAGAACCTTGGGCCCCTGGG
CCCCTTCACTCAGTACTTGGTGGACCACCATCACACCCTCCTGTGCAATGGGTATTGGCTTGCCTGGCTG
ATTCATGTGGGAGAGTCCTTGTATGCCATAGTATTGTGCAAGCAAAATGAGCTAAGAATACGGATAAAGA
TGAGAAAACTGATTCTGAGAGATTCTGAGTGA

Translation (103 aa):
MATAAGATYFQRGSLFWFTVITLSFGYYTWVVFWPQSIPYQNLGPLGPFTQYLVDHHHTLLCNGYWLAWL
IHVGESLYAIVLCKQNELRIRIKMRKLILRDSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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