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Report for CCDS58098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58098.1 Public Homo sapiens 10 INPP5F 24 110 108 CCDS HistoryNCBI Gene:22876Re-query CCDS DB by CCDS ID:58098.1Re-query CCDS DB by GeneID:22876See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58098.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650409.1 ENSP00000496955.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650409.1Link to Ensembl Protein Viewer:ENSP00000496955.1Re-query CCDS DB by Nucleotide ID:ENST00000650409Re-query CCDS DB by Protein ID:ENSP00000496955
Original member Current member NCBI NM_001243194.2 NP_001230123.1 Accepted alive Link to Nucleotide Sequence:NM_001243194.2Link to Protein Sequence:NP_001230123.1Re-query CCDS DB by Nucleotide ID:NM_001243194Re-query CCDS DB by Protein ID:NP_001230123Link to BLAST:NP_001230123.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230123.1 522 Q9Y2H2-4 522 100% 0 0

Chromosomal Locations for CCDS 58098.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 119819484 119819539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119820846 119820917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119822431 119822504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119823071 119823199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119823815 119823902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119826631 119827780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1569 nt):
ATGTGTCATGACGTAATTTTTATGGCTTGGCTCAAGCAACAATTTTCAGAGTGCACCCTCATTGATGCTA
CTCACAGAGACGTGGATGTGCTGTTACTGCTTTCTAACTCTGCCTACTACGTGGCCTATTATGATGATGA
AGTTGATAAAGTAAACCAGTATCAACGACTAAGTCTAGAAAACCTGGAAAAAATTGAAATAGGCCCTGAA
CCCACTCTTTTTGGTAAGCCAAAGTTCTCCTGCATGCGACTGCACTACAGATACAAAGAAGCGAGTGGCT
ATTTCCACACATTGCGAGCTGTAATGCGTAATCCTGAAGAGGATGGAAAAGATACCCTTCAGTGCATTGC
AGAGATGCTGCAGATCACCAAGCAAGCCATGGGATCGGATTTACCCATAATTGAGAAGAAACTTGAGAGG
AAGAGCAGTAAACCTCACGAAGACATCATTGGTATCAGGTCTCAAAACCAAGGTTCTTTGGCCCAGGGAA
AGAATTTTTTAATGAGCAAATTTTCATCTCTAAATCAAAAAGTGAAGCAGACCAAATCCAATGTAAATAT
TGGCAACCTCCGAAAGCTAGGAAACTTTACCAAACCTGAAATGAAAGTTAACTTTCTAAAACCAAACTTA
AAAGTAAATCTTTGGAAATCAGATAGTAGTCTTGAAACTATGGAAAACACAGGAGTGATGGATAAGGTTC
AGGCAGAGTCTGATGGGGACATGTCTTCAGATAATGACTCATACCACTCTGATGAATTCCTTACAAATTC
TAAGTCTGATGAAGACAGGCAGCTAGCTAACTCATTAGAGAGTGTAGGGCCAATAGATTACGTTCTTCCT
AGTTGTGGTATTATTGCCTCAGCGCCTCGATTGGGCAGTCGGTCCCAGTCTCTTAGCAGCACAGATAGTA
GCGTTCATGCTCCTTCAGAGATTACTGTTGCTCATGGGAGTGGGCTTGGAAAAGGCCAGGAGTCTCCTTT
GAAGAAAAGTCCTTCTGCTGGCGACGTACACATATTGACTGGCTTTGCCAAGCCTATGGATATTTACTGC
CACAGATTTGTGCAAGATGCACAGAACAAAGTGACCCACCTATCAGAGACCAGATCTGTGTCTCAGCAGG
CTAGTCAGGAAAGAAATCAAATGACCAATCAAGTTTCAAATGAAACCCAATCAGAATCAACAGAACAGAC
ACCTTCTCGGCCATCGCAATTAGATGTCTCTCTTTCTGCAACAGGCCCACAGTTTTTGTCAGTTGAGCCA
GCGCATTCAGTTGCATCTCAAAAAACCCCCACCTCCGCTTCCAGCATGCTTGAACTTGAGACAGGGCTTC
ATGTAACTCCTTCTCCTTCAGAGAGCAGTAGCAGCAGAGCAGTCTCTCCCTTTGCCAAGATTCGAAGTTC
CATGGTCCAGGTTGCTAGTATTACCCAAGCTGGATTAACCCATGGGATAAACTTTGCAGTGTCAAAAGTT
CAGAAGAGTCCTCCAGAACCTGAAATCATTAATCAAGTCCAGCAAAATGAACTTAAAAAGATGTTTATAC
AATGCCAGACACGGATAATTCAGATTTAG

Translation (522 aa):
MCHDVIFMAWLKQQFSECTLIDATHRDVDVLLLLSNSAYYVAYYDDEVDKVNQYQRLSLENLEKIEIGPE
PTLFGKPKFSCMRLHYRYKEASGYFHTLRAVMRNPEEDGKDTLQCIAEMLQITKQAMGSDLPIIEKKLER
KSSKPHEDIIGIRSQNQGSLAQGKNFLMSKFSSLNQKVKQTKSNVNIGNLRKLGNFTKPEMKVNFLKPNL
KVNLWKSDSSLETMENTGVMDKVQAESDGDMSSDNDSYHSDEFLTNSKSDEDRQLANSLESVGPIDYVLP
SCGIIASAPRLGSRSQSLSSTDSSVHAPSEITVAHGSGLGKGQESPLKKSPSAGDVHILTGFAKPMDIYC
HRFVQDAQNKVTHLSETRSVSQQASQERNQMTNQVSNETQSESTEQTPSRPSQLDVSLSATGPQFLSVEP
AHSVASQKTPTSASSMLELETGLHVTPSPSESSSSRAVSPFAKIRSSMVQVASITQAGLTHGINFAVSKV
QKSPPEPEIINQVQQNELKKMFIQCQTRIIQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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