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Report for CCDS58099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58099.1 Public Homo sapiens 10 MCMBP 24 110 108 CCDS HistoryNCBI Gene:79892Re-query CCDS DB by CCDS ID:58099.1Re-query CCDS DB by GeneID:79892See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58099.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369077.4 ENSP00000358073.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369077.4Link to Ensembl Protein Viewer:ENSP00000358073.3Re-query CCDS DB by Nucleotide ID:ENST00000369077Re-query CCDS DB by Protein ID:ENSP00000358073
Original member Current member NCBI NM_001256378.2 NP_001243307.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001256378.2Link to Protein Sequence:NP_001243307.1Re-query CCDS DB by Nucleotide ID:NM_001256378Re-query CCDS DB by Protein ID:NP_001243307Link to BLAST:NP_001243307.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243307.1 640 Q9BTE3-2 640 100% 0 0

Chromosomal Locations for CCDS 58099.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 119831474 119831600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119832012 119832100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119835540 119835704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119836896 119837029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119838535 119838700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119840843 119840960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119842472 119842595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119843254 119843426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119847613 119847713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119849425 119849576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119853050 119853194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119857338 119857439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119858884 119858925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119859041 119859181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119859799 119859884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119872527 119872584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1923 nt):
ATGCCGTGTGGGGAGGATTGGCTCAGCCACCCGCTGGGAATCGTGCAGGGATTCTTCGCCCAAAATGGAG
TTAATCCTGACTGGGAGAAGAAAGTAATTGAGTATTTTAAGGAAAAGCTGAAGGAAAATAATGCTCCTAA
GTGGGTACCATCACTGAACGAAGTTCCCCTTCATTATTTGAAACCTAATAGTTTTGTGAAATTTCGTTGC
ATGATTCAGGATATGTTTGACCCTGAGTTTTACATGGGAGTTTATGAAACGGTTAACCAAAACACAAAAG
CACATGTTCTTCATTTTGGAAAATATAGAGATGTAGCAGAGTGTGGGCCTCAACAAGAACTTGATTTAAA
CTCTCCACGAAATACCACTTTGGAAAGACAGACTTTCTATTGTGTTCCGGTGCCTGGGGAATCTACGTGG
GTAAAAGAAGCCTATGTTAATGCAAACCAAGCTCGAGTCAGTCCCTCAACATCCTACACTCCTAGTCGCC
ACAAGAGGAGTTATGAAGATGATGACGATATGGACCTACAGCCCAATAAGCAGAAAGACCAACATGCAGG
TGCCAGACAAGCAGGGAGTGTTGGTGGTCTTCAATGGTGTGGAGAGCCAAAACGTTTAGAAACTGAAGCT
TCTACTGGGCAACAGCTGAACTCTCTGAACTTGTCTTCTCCTTTTGATTTGAATTTTCCATTGCCAGGAG
AGAAGGGCCCTGCATGCCTTGTGAAGGTTTATGAAGATTGGGATTGTTTCAAAGTAAATGACATTCTTGA
GCTATATGGCATACTGTCTGTGGATCCTGTGCTGAGTATACTGAATAATGATGAAAGGGATGCCTCTGCA
CTGCTGGATCCGATGGAGTGCACAGACACAGCAGAGGAGCAGAGAGTACACAGTCCTCCTGCTTCATTAG
TGCCGAGAATTCATGTGATCTTAGCCCAGAAGTTGCAACACATCAACCCATTATTGCCTGCCTGCCTTAA
CAAAGAGGAGAGCAAAACCTTTGTTTCAAGTTTCATGTCCGAATTGTCTCCAGTCAGAGCAGAACTTCTT
GGGTTCCTTACTCATGCCCTTCTGGGGGATAGTTTGGCTGCTGAATACCTTATATTACATCTCATCTCCA
CAGTATATACAAGAAGAGATGTCCTTCCACTAGGAAAATTTACAGTTAACTTGAGTGGTTGCCCACGGAA
TAGTACCTTCACAGAACACTTGTATCGAATTATTCAACATCTTGTTCCAGCATCTTTTCGTCTGCAGATG
ACTATAGAGAACATGAACCATTTGAAATTCATTCCCCACAAAGACTACACAGCCAATCGCTTGGTCAGTG
GGCTCCTCCAGCTGCCCAGCAATACTTCCCTTGTAATCGATGAGACTCTCCTGGAACAGGGGCAGCTGGA
TACCCCAGGTGTTCATAATGTGACAGCCCTGAGCAACCTCATAACGTGGCAGAAGGTGGATTATGACTTC
AGCTACCATCAGATGGAATTCCCCTGCAATATTAACGTTTTCATTACTTCGGAGGGGAGGTCACTCCTCC
CGGCAGACTGCCAGATTCACTTACAGCCCCAGCTAATTCCACCAAACATGGAGGAGTACATGAACAGCCT
TCTCTCAGCGGTGCTGCCTTCCGTGCTGAACAAATTCCGCATTTATCTAACTCTTTTGAGATTCTTGGAA
TATAGCATATCTGATGAAATAACCAAGGCAGTTGAAGATGACTTTGTGGAAATGCGGAAGAACGACCCTC
AGAGCATCACTGCTGATGATCTTCACCAGCTGCTCGTGGTGGCTCGGTGTCTGTCTCTCAGTGCTGGTCA
GACAACGCTGTCAAGAGAACGATGGCTGAGAGCAAAGCAGCTAGAGTCTTTAAGAAGAACGAGGCTTCAG
CAGCAAAAATGTGTGAATGGAAATGAACTTTAA

Translation (640 aa):
MPCGEDWLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVKFRC
MIQDMFDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTW
VKEAYVNANQARVSPSTSYTPSRHKRSYEDDDDMDLQPNKQKDQHAGARQAGSVGGLQWCGEPKRLETEA
STGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVNDILELYGILSVDPVLSILNNDERDASA
LLDPMECTDTAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTFVSSFMSELSPVRAELL
GFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQM
TIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDYDF
SYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLLSAVLPSVLNKFRIYLTLLRFLE
YSISDEITKAVEDDFVEMRKNDPQSITADDLHQLLVVARCLSLSAGQTTLSRERWLRAKQLESLRRTRLQ
QQKCVNGNEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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