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Report for CCDS58344.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58344.1 Public Homo sapiens 15 FAN1 24 110 108 CCDS HistoryNCBI Gene:22909Re-query CCDS DB by CCDS ID:58344.1Re-query CCDS DB by GeneID:22909See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58344.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561607.6 ENSP00000454223.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561607.6Link to Ensembl Protein Viewer:ENSP00000454223.1Re-query CCDS DB by Nucleotide ID:ENST00000561607Re-query CCDS DB by Protein ID:ENSP00000454223
Original member Current member EBI ENST00000565466.5 ENSP00000454544.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565466.5Link to Ensembl Protein Viewer:ENSP00000454544.1Re-query CCDS DB by Nucleotide ID:ENST00000565466Re-query CCDS DB by Protein ID:ENSP00000454544
Original member Current member EBI ENST00000561594.5 ENSP00000455983.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561594.5Link to Ensembl Protein Viewer:ENSP00000455983.1Re-query CCDS DB by Nucleotide ID:ENST00000561594Re-query CCDS DB by Protein ID:ENSP00000455983
Original member Current member EBI ENST00000658773.1 ENSP00000499742.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000658773.1Link to Ensembl Protein Viewer:ENSP00000499742.1Re-query CCDS DB by Nucleotide ID:ENST00000658773Re-query CCDS DB by Protein ID:ENSP00000499742
Original member Current member NCBI NM_001146094.2 NP_001139566.1 Accepted alive Link to Nucleotide Sequence:NM_001146094.2Link to Protein Sequence:NP_001139566.1Re-query CCDS DB by Nucleotide ID:NM_001146094Re-query CCDS DB by Protein ID:NP_001139566Link to BLAST:NP_001139566.1
Original member Current member NCBI NM_001146095.1 NP_001139567.1 Accepted alive Link to Nucleotide Sequence:NM_001146095.1Link to Protein Sequence:NP_001139567.1Re-query CCDS DB by Nucleotide ID:NM_001146095Re-query CCDS DB by Protein ID:NP_001139567Link to BLAST:NP_001139567.1
Original member Current member NCBI NM_001146096.2 NP_001139568.1 Accepted alive Link to Nucleotide Sequence:NM_001146096.2Link to Protein Sequence:NP_001139568.1Re-query CCDS DB by Nucleotide ID:NM_001146096Re-query CCDS DB by Protein ID:NP_001139568Link to BLAST:NP_001139568.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139566.1 533 Q9Y2M0-2 533 100% 0 0
NP_001139567.1 533 Q9Y2M0-2 533 100% 0 0
NP_001139568.1 533 Q9Y2M0-2 533 100% 0 0

Chromosomal Locations for CCDS 58344.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 30904664 30905897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30908118 30908258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30910614 30910840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGATGTCAGAAGGGAAACCTCCTGACAAAAAAAGGCCTCGTAGAAGCTTATCAATCAGCAAGAATAAGA
AAAAAGCATCTAATTCTATTATTTCGTGTTTTAACAATGCACCACCTGCTAAACTTGCCTGCCCCGTTTG
CAGTAAAATGGTGCCTAGATATGACTTAAACCGGCACCTTGATGAAATGTGTGCTAACAATGACTTCGTT
CAAGTGGATCCAGGGCAGGTTGGCTTAATAAATTCAAATGTGTCTATGGTAGATTTAACCAGTGTTACCT
TAGAAGATGTAACACCTAAGAAGTCACCACCACCAAAGACAAATTTAACCCCTGGCCAAAGTGATTCAGC
AAAAAGGGAAGTAAAGCAGAAGATCAGTCCCTACTTTAAAAGTAATGATGTGGTGTGCAAAAATCAAGAT
GAGCTGAGAAATCGTAGTGTGAAAGTCATTTGTTTGGGAAGCCTAGCATCTAAATTGTCCAGAAAATACG
TAAAGGCTAAAAAATCAATAGATAAGGATGAAGAATTTGCCGGTTCTAGTCCACAGAGTTCCAAATCCAC
AGTTGTTAAGAGCCTGATTGATAACTCTTCAGAAATTGAGGACGAGGATCAAATTTTGGAGAACAGTTCT
CAAAAAGAAAACGTGTTTAAATGTGATTCTCTAAAGGAAGAGTGCATTCCTGAACATATGGTAAGAGGAA
GTAAAATAATGGAAGCCGAAAGCCAAAAGGCTACCCGGGAATGTGAGAAATCAGCCCTCACCCCTGGATT
CTCAGATAATGCGATCATGTTATTCTCACCAGATTTCACTCTTAGGAATACATTAAAGTCTACTTCAGAA
GACAGTCTTGTAAAGCAAGAGTGTATCAAAGAAGTGGTTGAAAAACGTGAGGCATGTCATTGTGAAGAAG
TAAAAATGACTGTTGCTTCAGAAGCTAAAATACAGCTGTCAGATTCAGAGGCAAAATCTCATAGTTCTGC
AGATGATGCTTCTGCATGGAGTAACATCCAAGAGGCTCCTCTGCAGGATGACAGTTGCTTAAACAATGAT
ATCCCTCACAGCATTCCTTTGGAGCAGGGGTCAAGCTGCAATGGTCCTGGTCAAACAACCGGTCATCCTT
ACTACCTTCGGAGTTTCCTTGTGGTGCTGAAAACCGTACTTGAGAATGAAGATGATATGTTGCTCTTTGA
TGAGCAGGAGAAGGGAATTGTAACTAAATTTTATCAGTTATCAGCTACTGGTCAGAAGTTATATGTAAGG
CTCTTTCAACGTAAATTAAGCTGGATTAAGATGACCAAATTAGAGTATGAAGAGATTGCCTTAGACTTAA
CACCTGTGATTGAAGAATTGACGAATGCAGGCTTTCTACAGACAGAATCTGAGTTGCAAGAACTCTCTGA
AGTGCTTGAACTCCTTTCTGCTCCTGAACTAAAATCCCTAGCCAAGACCTTCCACTTGGTGAATCCCAAT
GGACAGAAACAGCAGCTGGTGGACGCCTTTCTCAAATTGGCCAAACAGCGTTCAGTCTGCACTTGGGGCA
AGAATAAGCCTGGAATTGGTGCAGTGATTTTAAAAAGGTTTTGTTGGCTATTGTTACAGTAA

Translation (533 aa):
MMSEGKPPDKKRPRRSLSISKNKKKASNSIISCFNNAPPAKLACPVCSKMVPRYDLNRHLDEMCANNDFV
QVDPGQVGLINSNVSMVDLTSVTLEDVTPKKSPPPKTNLTPGQSDSAKREVKQKISPYFKSNDVVCKNQD
ELRNRSVKVICLGSLASKLSRKYVKAKKSIDKDEEFAGSSPQSSKSTVVKSLIDNSSEIEDEDQILENSS
QKENVFKCDSLKEECIPEHMVRGSKIMEAESQKATRECEKSALTPGFSDNAIMLFSPDFTLRNTLKSTSE
DSLVKQECIKEVVEKREACHCEEVKMTVASEAKIQLSDSEAKSHSSADDASAWSNIQEAPLQDDSCLNND
IPHSIPLEQGSSCNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYVR
LFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKSLAKTFHLVNPN
GQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRFCWLLLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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