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Report for CCDS58382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58382.1 Public Homo sapiens 15 STOML1 24 110 108 CCDS HistoryNCBI Gene:9399Re-query CCDS DB by CCDS ID:58382.1Re-query CCDS DB by GeneID:9399See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 58382.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316900.9 ENSP00000319323.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316900.9Link to Ensembl Protein Viewer:ENSP00000319323.6Re-query CCDS DB by Nucleotide ID:ENST00000316900Re-query CCDS DB by Protein ID:ENSP00000319323
Original member Current member NCBI NM_001256677.1 NP_001243606.1 Accepted alive Link to Nucleotide Sequence:NM_001256677.1Link to Protein Sequence:NP_001243606.1Re-query CCDS DB by Nucleotide ID:NM_001256677Re-query CCDS DB by Protein ID:NP_001243606Link to BLAST:NP_001243606.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243606.1 355 Q9UBI4-5 355 100% 0 0

Chromosomal Locations for CCDS 58382.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 73983937 73984130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73984659 73984868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73985318 73985513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73988599 73988802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73989108 73989257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73990351 73990457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73990815 73990821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGCCAGATGTACCCCAGAGCTGGCCCTCCTGCCTCTGTCATGGCCTCATCAGTTTCCTGGGGTTCTTGC
TGCTGTTGGTCACCTTCCCCATTTCTGGCTGGTTTGCCCTGAAGATTGTGCCCACCTACGAGCGGATGAT
TGTGTTCCGCCTGGGCCGGATCCGCACCCCCCAGGGACCTGGCATGGTTCTGCTCTTGCCCTTCATTGAC
TCCTTTCAGAGGGTGGATCTGAGGACACGAGCCTTCAACGTCCCTCCCTGCAAGCTGGCCTCTAAGGACG
GGGCTGTGCTGTCCGTGGGAGCCGATGTCCAGTTTCGCATCTGGGACCCGGTGCTGTCGGTGATGACTGT
GAAAGACCTGAACACAGCCACACGCATGACAGCCCAGAACGCCATGACCAAGGCCCTGCTCAAGAGGCCG
CTGCGGGAGATCCAGATGGAGAAGCTCAAGATCAGCGACCAGCTTCTGCTGGAGATCAACGATGTGACCA
GGGCCTGGGGGCTGGAGGTAGACCGCGTGGAGCTGGCAGTGGAGGCCGTGCTCCAGCCGCCCCAGGACAG
CCCAGCTGGGCCCAACCTGGACAGCACCCTCCAGCAGCTGGCCCTGCACTTCCTGGGAGGAAGCATGAAC
TCAATGGCAGGAGGTGCCCCGTCCCCGGGGCCAGACACCGTGGAGATGGTGAGTGAAGTTGAGCCACCTG
CCCCTCAAGTTGGTGCCAGGTCCAGTCCGAAGCAGCCTCTGGCGGAGGGGCTACTGACTGCTCTACAGCC
CTTCCTGTCTGAGGCCCTGGTCAGCCAAGTCGGGGCCTGCTACCAGTTCAATGTCGTCCTGCCCAGCGGC
ACCCAAAGCGCCTACTTCCTGGACCTCACTACAGGACGAGGAAGAGTGGGACACGGGGTGCCTGATGGCA
TCCCTGATGTGGTGGTGGAGATGGCCGAGGCAGACCTGCGGGCCCTGCTATGCAGAGAGCTGCGGCCCCT
GGGGGCCTACATGAGTGGACGGCTGAAGGTGAAGGGCGACCTGGCTATGGCCATGAAGCTGGAGGCTGTC
CTCAGGGCCTTGAAGTAG

Translation (355 aa):
MPDVPQSWPSCLCHGLISFLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFID
SFQRVDLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRP
LREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMN
SMAGGAPSPGPDTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQPFLSEALVSQVGACYQFNVVLPSG
TQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAV
LRALK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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