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Report for CCDS58460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58460.1 Public Homo sapiens 16 NETO2 24 110 108 CCDS HistoryNCBI Gene:81831Re-query CCDS DB by CCDS ID:58460.1Re-query CCDS DB by GeneID:81831See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303155.9 ENSP00000306726.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000303155.9Link to Ensembl Protein Viewer:ENSP00000306726.5Re-query CCDS DB by Nucleotide ID:ENST00000303155Re-query CCDS DB by Protein ID:ENSP00000306726
Original member Current member NCBI NM_001201477.2 NP_001188406.1 Accepted alive Link to Nucleotide Sequence:NM_001201477.2Link to Protein Sequence:NP_001188406.1Re-query CCDS DB by Nucleotide ID:NM_001201477Re-query CCDS DB by Protein ID:NP_001188406Link to BLAST:NP_001188406.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001188406.1 518 Q8NC67-3 518 100% 0 0

Chromosomal Locations for CCDS 58460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 47083221 47083801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47086226 47086339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47109483 47109711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47122657 47122784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47122889 47122912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47128325 47128573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47129224 47129364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47131969 47132025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 47143579 47143612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1557 nt):
ATGGCCCTGGAGCGGCTCTGCTCGGTCCTCAAAGTGTTGTTAATAACAGTACTGGTAGTGGAAGGGATTG
CCGTGGCCCAAAAAACCCAAGATGGACAAAATATTGGAATCAAGCATATTCCTGCAACCCAGTGTGGCAT
TTGGGTTCGAACCAGCAATGGAGGTCATTTTGCTTCGCCAAATTATCCTGACTCATATCCACCAAACAAG
GAGTGTATCTACATTTTGGAAGCTGCTCCACGTCAAAGAATAGAGTTGACCTTTGATGAACATTATTATA
TAGAACCATCATTTGAGTGTCGGTTTGATCACTTGGAAGTTCGAGATGGGCCATTTGGTTTCTCTCCTCT
TATAGATCGTTACTGTGGCGTGAAAAGCCCTCCATTAATTAGATCAACAGGGAGATTCATGTGGATTAAG
TTTAGTTCTGATGAAGAGCTTGAAGGACTGGGATTTCGAGCAAAATATTCATTTATTCCAGATCCAGACT
TTACTTACCTAGGAGATTGTCAGTTCGAGCTCTCGGGAGCTGATGGAATAGTGCGCTCTAGTCAGGTAGA
ACAAGAGGAGAAAACAAAACCAGGCCAAGCCGTTGATTGCATCTGGACCATTAAAGCCACTCCAAAAGCT
AAGATTTATTTGAGGTTCCTAGATTATCAAATGGAGCACTCAAATGAATGCAAGAGAAACTTCGTTGCAG
TCTATGATGGAAGCAGTTCTATTGAAAACCTGAAGGCCAAGTTTTGCAGCACTGTGGCCAATGATGTAAT
GCTTAAAACAGGAATTGGAGTGATTCGAATGTGGGCAGATGAAGGTAGTCGGCTTAGCAGGTTTCGAATG
CTCTTTACTTCCTTTGTGGAGCCTCCCTGCACAAGCAGCACTTTCTTTTGCCATAGCAACATGTGCATCA
ATAATTCTTTAGTCTGTAATGGTGTCCAAAATTGTGCATACCCTTGGGATGAAAATCATTGTAAAGAAAA
GAAAAAAGCAGGAGTATTTGAACAAATCACTAAGACTCATGGAACAATTATTGGCATTACTTCAGGGATT
GTCTTGGTCCTTCTCATTATTTCTATTTTAGTACAAGTGAAACAGCCTCGAAAAAAGGTCATGGCTTGCA
AAACCGCTTTTAATAAAACCGGGTTCCAAGAAGTGTTTGATCCTCCTCATTATGAACTGTTTTCACTAAG
GGACAAAGAGATTTCTGCAGACCTGGCAGACTTGTCGGAAGAATTGGACAACTACCAGAAGATGCGGCGC
TCCTCCACCGCCTCCCGCTGCATCCACGACCACCACTGTGGGTCGCAGGCCTCCAGCGTCAAACAAAGCA
GGACCAACCTCAGTTCCATGGAACTTCCTTTCCGAAATGACTTTGCACAACCACAGCCAATGAAAACATT
TAATAGCACCTTCAAGAAAAGTAGTTACACTTTCAAACAGGGACATGAGTGCCCTGAGCAGGCCCTGGAA
GACCGAGTAATGGAGGAGATTCCCTGTGAAATTTATGTCAGGGGGCGAGAAGATTCTGCACAAGCATCCA
TATCCATTGACTTCTAA

Translation (518 aa):
MALERLCSVLKVLLITVLVVEGIAVAQKTQDGQNIGIKHIPATQCGIWVRTSNGGHFASPNYPDSYPPNK
ECIYILEAAPRQRIELTFDEHYYIEPSFECRFDHLEVRDGPFGFSPLIDRYCGVKSPPLIRSTGRFMWIK
FSSDEELEGLGFRAKYSFIPDPDFTYLGDCQFELSGADGIVRSSQVEQEEKTKPGQAVDCIWTIKATPKA
KIYLRFLDYQMEHSNECKRNFVAVYDGSSSIENLKAKFCSTVANDVMLKTGIGVIRMWADEGSRLSRFRM
LFTSFVEPPCTSSTFFCHSNMCINNSLVCNGVQNCAYPWDENHCKEKKKAGVFEQITKTHGTIIGITSGI
VLVLLIISILVQVKQPRKKVMACKTAFNKTGFQEVFDPPHYELFSLRDKEISADLADLSEELDNYQKMRR
SSTASRCIHDHHCGSQASSVKQSRTNLSSMELPFRNDFAQPQPMKTFNSTFKKSSYTFKQGHECPEQALE
DRVMEEIPCEIYVRGREDSAQASISIDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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