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Report for CCDS58466.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58466.1 Public Homo sapiens 16 NDRG4 24 110 108 CCDS HistoryNCBI Gene:65009Re-query CCDS DB by CCDS ID:58466.1Re-query CCDS DB by GeneID:65009See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58466.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000570248.6 ENSP00000457659.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000570248.6Link to Ensembl Protein Viewer:ENSP00000457659.1Re-query CCDS DB by Nucleotide ID:ENST00000570248Re-query CCDS DB by Protein ID:ENSP00000457659
Original member Current member NCBI NM_001242835.2 NP_001229764.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001242835.2Link to Protein Sequence:NP_001229764.1Re-query CCDS DB by Nucleotide ID:NM_001242835Re-query CCDS DB by Protein ID:NP_001229764Link to BLAST:NP_001229764.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229764.1 352 Q9ULP0-1 352 100% 0 0

Chromosomal Locations for CCDS 58466.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 58500249 58500269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58503798 58503903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58504154 58504274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58504359 58504421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58504589 58504649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58506387 58506473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58506558 58506614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58506912 58507015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58507808 58507864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58507948 58507999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58508962 58509009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58509154 58509189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58509301 58509352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58510645 58510683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58511422 58511576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGCCGGAGTGCTGGGATGGGGAACATGACATCGAGACACCCTACGGCCTTCTGCATGTAGTGATCCGGG
GCTCCCCCAAGGGGAACCGCCCAGCCATCCTCACCTACCATGATGTGGGCCTCAACCACAAACTATGCTT
CAACACCTTCTTCAACTTCGAGGACATGCAGGAGATCACCAAGCACTTTGTGGTGTGTCACGTGGATGCC
CCTGGACAACAGGTGGGGGCGTCGCAGTTTCCTCAGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCTG
CCATGCTCCCCAGCGTGGTGCAGCATTTCGGGTTCAAGTATGTGATTGGCATCGGAGTGGGCGCCGGAGC
CTATGTGCTGGCCAAGTTTGCACTCATCTTCCCCGACCTGGTGGAGGGGCTGGTGCTGGTGAACATCGAC
CCCAATGGCAAAGGCTGGATAGACTGGGCTGCCACCAAGCTCTCCGGCCTAACTAGCACTTTACCCGACA
CGGTGCTCTCCCACCTCTTCAGCCAGGAGGAGCTGGTGAACAACACAGAGTTGGTGCAGAGCTACCGGCA
GCAGATTGGGAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACATGTACAACAGCCGCAGAGAC
CTGGACATTAACCGGCCTGGAACGGTGCCCAATGCCAAGACGCTCCGCTGCCCCGTGATGCTGGTGGTTG
GGGATAATGCACCCGCTGAGGACGGGGTGGTGGAGTGCAACTCCAAACTGGACCCGACCACTACGACCTT
CCTGAAGATGGCAGACTCTGGAGGGCTGCCCCAGGTCACACAGCCAGGGAAGCTGACTGAAGCCTTCAAA
TACTTCCTGCAAGGCATGGGCTACATTGCGTACTTGAAGGACCGAAGGCTGAGTGGAGGAGCAGTGCCCT
CAGCCAGCATGACCCGCCTGGCACGCTCCCGCACTGCATCCCTCACCAGTGCCAGCTCGGTGGATGGCAG
CCGCCCACAGGCCTGCACCCACTCAGAGAGCAGCGAGGGGCTGGGCCAGGTCAACCACACCATGGAGGTG
TCCTGTTGA

Translation (352 aa):
MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDA
PGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNID
PNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRD
LDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFK
YFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEV
SC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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