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Report for CCDS58473.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58473.1 Public Homo sapiens 16 NOL3 24 110 108 CCDS HistoryNCBI Gene:8996Re-query CCDS DB by CCDS ID:58473.1Re-query CCDS DB by GeneID:8996See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58473.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000568146.1 ENSP00000454598.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000568146.1Link to Ensembl Protein Viewer:ENSP00000454598.1Re-query CCDS DB by Nucleotide ID:ENST00000568146Re-query CCDS DB by Protein ID:ENSP00000454598
Original member Current member NCBI NM_001185057.3 NP_001171986.1 Accepted alive Link to Nucleotide Sequence:NM_001185057.3Link to Protein Sequence:NP_001171986.1Re-query CCDS DB by Nucleotide ID:NM_001185057Re-query CCDS DB by Protein ID:NP_001171986Link to BLAST:NP_001171986.1
Original member Current member NCBI NM_001394977.1 NP_001381906.1 Accepted alive Link to Nucleotide Sequence:NM_001394977.1Link to Protein Sequence:NP_001381906.1Re-query CCDS DB by Nucleotide ID:NM_001394977Re-query CCDS DB by Protein ID:NP_001381906Link to BLAST:NP_001381906.1
Original member Current member NCBI NM_001394978.1 NP_001381907.1 Accepted alive Link to Nucleotide Sequence:NM_001394978.1Link to Protein Sequence:NP_001381907.1Re-query CCDS DB by Nucleotide ID:NM_001394978Re-query CCDS DB by Protein ID:NP_001381907Link to BLAST:NP_001381907.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171986.1 219 O60936-1 219 100% 0 0
NP_001381906.1 219 O60936-1 219 100% 0 0
NP_001381907.1 219 O60936-1 219 100% 0 0

Chromosomal Locations for CCDS 58473.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67174170 67174454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67174621 67174944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67175047 67175097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (660 nt):
ATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCCTGGTCGAGACGCTGC
AGGCGGACTCGGGACTGCTGTTGGACGCGCTGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGC
ATTGGATGCACTGCCTGATGCCGAGCGCAGGGTGCGCCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAG
GCCGCCTGCCAGGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGCGCCGGACCCCGCTTGGGACTGGC
AGCACGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCG
GGGACCACATGCCCCGGGTTGCCCAGAGCTTCAGACCCTGACGAGGCCGGGGGCCCTGAGGGCTCCGAGG
CGGTGCAATCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAGGCCTCTAAAGAGGCTGAACC
GGAGCCGGAGCCAGAGCCAGAGCTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAGCCAGAA
CCGGACCCAGAGCCCGAGCCCGACTTCGAGGAAAGGGACGAGTCCGAAGATTCCTGAAGGCCAGAGCTCT
GACAGGCGGTGCCCCGCCCATGCTGGATAG

Translation (219 aa):
MGNAQERPSETIDRERKRLVETLQADSGLLLDALLARGVLTGPEYEALDALPDAERRVRRLLLLVQGKGE
AACQELLRCAQRTAGAPDPAWDWQHATGTAAMTLHAQATGRRRHPARGPHAPGCPELQTLTRPGALRAPR
RCNPGPRRSQSQSWKLRPLKRLNRSRSQSQSWNPRLKQNQSRNWSQNRTQSPSPTSRKGTSPKIPEGQSS
DRRCPAHAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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