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Report for CCDS58667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58667.1 Public Homo sapiens 19 PINLYP 24 110 108 CCDS HistoryNCBI Gene:390940Re-query CCDS DB by CCDS ID:58667.1Re-query CCDS DB by GeneID:390940See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58667.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000562365.2 ENSP00000456310.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562365.2Link to Ensembl Protein Viewer:ENSP00000456310.1Re-query CCDS DB by Nucleotide ID:ENST00000562365Re-query CCDS DB by Protein ID:ENSP00000456310
Original member Current member EBI ENST00000569031.6 ENSP00000457369.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569031.6Link to Ensembl Protein Viewer:ENSP00000457369.1Re-query CCDS DB by Nucleotide ID:ENST00000569031Re-query CCDS DB by Protein ID:ENSP00000457369
Original member Current member EBI ENST00000562255.5 ENSP00000457623.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562255.5Link to Ensembl Protein Viewer:ENSP00000457623.1Re-query CCDS DB by Nucleotide ID:ENST00000562255Re-query CCDS DB by Protein ID:ENSP00000457623
Original member Current member NCBI NM_001193622.2 NP_001180551.1 Accepted alive Link to Nucleotide Sequence:NM_001193622.2Link to Protein Sequence:NP_001180551.1Re-query CCDS DB by Nucleotide ID:NM_001193622Re-query CCDS DB by Protein ID:NP_001180551Link to BLAST:NP_001180551.1
Original member Current member NCBI NM_001321124.2 NP_001308053.1 Accepted alive Link to Nucleotide Sequence:NM_001321124.2Link to Protein Sequence:NP_001308053.1Re-query CCDS DB by Nucleotide ID:NM_001321124Re-query CCDS DB by Protein ID:NP_001308053Link to BLAST:NP_001308053.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180551.1 116 A6NC86-4 116 100% 0 0
NP_001308053.1 116 A6NC86-4 116 100% 0 0

Chromosomal Locations for CCDS 58667.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43581289 43581364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43581563 43581703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43581868 43582001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGGCCCCAAGGACCACATGGTAACCAGCTCCTTCTGCTGCCAGAGCGACGGCTGCAACAGTGCCTTTT
TGTCTGTTCCCTTGACCAATCTTACTGAGAATGGCCTGATGTGCCCCGCCTGCACTGCGAGCTTCAGGGA
CAAATGCATGGGGCCCATGACCCACTGTACTGGAAAGGAAAACCACTGCGTCTCCTTATCTGGACACGTG
CAGGCTGGTATTTTCAAACCCAGATTTGCTATGCGGGGCTGTGCTACAGAGAGTATGTGCTTTACCAAGC
CTGGTGCTGAAGTACCCACAGGCACCAATGTCCTCTTCCTCCATCATATAGAGTGCACTCACTCCCCCTG
A

Translation (116 aa):
MGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHV
QAGIFKPRFAMRGCATESMCFTKPGAEVPTGTNVLFLHHIECTHSP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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