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Report for CCDS5899.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5899.1 Public Homo sapiens 7 ZNF467 24 110 108 CCDS HistoryNCBI Gene:168544Re-query CCDS DB by CCDS ID:5899.1Re-query CCDS DB by GeneID:168544See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5899.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302017.4 ENSP00000304769.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302017.4Link to Ensembl Protein Viewer:ENSP00000304769.3Re-query CCDS DB by Nucleotide ID:ENST00000302017Re-query CCDS DB by Protein ID:ENSP00000304769
Original member Current member NCBI NM_207336.3 NP_997219.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207336.3Link to Protein Sequence:NP_997219.1Re-query CCDS DB by Nucleotide ID:NM_207336Re-query CCDS DB by Protein ID:NP_997219Link to BLAST:NP_997219.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997219.1 595 Q7Z7K2 595 100% 0 0

Chromosomal Locations for CCDS 5899.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 149764714 149766239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149769090 149769200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149770440 149770556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149770999 149771032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1788 nt):
ATGAGAGAGACCTTGGAGGCCCTCAGCTCCCTGGGATTCTCTGTGGGACAGCCAGAGATGGCCCCCCAAA
GTGAGCCCAGGGAAGGATCCCATAATGCCCAGGAGCAGATGTCCTCTTCTAGGGAAGAGAGAGCACTGGG
GGTGTGCTCAGGGCACGAGGCCCCTACACCGGAGGAAGGTGCCCACACAGAACAAGCCGAGGCTCCCTGC
AGAGGCCAGGCGTGCTCAGCACAGAAGGCTCAGCCTGTGGGTACCTGCCCAGGAGAGGAGTGGATGATTC
GGAAGGTGAAGGTGGAGGACGAAGATCAGGAGGCAGAAGAGGAGGTCGAATGGCCCCAGCATCTATCGTT
ACTTCCCAGCCCCTTTCCCGCGCCTGACCTGGGGCATCTGGCTGCCGCGTACAAACTGGAGCCAGGGGCC
CCGGGGGCACTGAGTGGGCTCGCGCTGTCTGGGTGGGGTCCGATGCCGGAGAAGCCCTACGGCTGCGGGG
AGTGTGAGCGGCGCTTCCGGGACCAGCTGACGTTGCGACTGCACCAGCGGCTGCACCGGGGCGAGGGCCC
CTGCGCCTGCCCGGACTGCGGCCGCAGCTTCACGCAGCGCGCCCACATGCTACTGCATCAGCGCAGCCAC
CGCGGCGAGCGGCCTTTCCCGTGCTCCGAGTGCGACAAGCGCTTCAGCAAGAAGGCCCATCTGACCCGCC
ACCTGCGCACGCACACGGGCGAGCGGCCCTACCCGTGCGCGGAGTGCGGCAAGCGCTTCAGCCAGAAGAT
CCACCTGGGCTCGCACCAAAAGACCCACACCGGCGAGCGGCCCTTCCCCTGCACGGAATGCGAGAAGCGC
TTTCGCAAGAAGACGCACTTGATTCGGCACCAGCGCATCCATACGGGCGAGAGGCCCTACCAGTGCGCAC
AGTGCGCACGCAGCTTCACGCACAAGCAGCACTTGGTGCGGCACCAAAGGGTGCACCAGACGGCCGGCCC
GGCCAGGCCCTCTCCCGACTCGTCCGCTTCTCCTCATTCCACTGCCCCGTCCCCGACCCCATCCTTTCCC
GGGCCAAAGCCTTTCGCGTGCTCCGACTGCGGCTTGAGCTTCGGCTGGAAAAAGAACCTCGCCACGCACC
AGTGTCTGCACCGCAGCGAGGGTCGCCCCTTTGGGTGCGATGAGTGCGCACTGGGCGCCACCGTGGATGC
CCCCGCCGCCAAGCCCCTGGCCAGCGCGCCTGGCGGACCGGGCTGCGGCCCAGGATCCGATCCCGTGGTG
CCCCAGCGCGCCCCCTCGGGCGAGCGGTCCTTCTTCTGCCCGGACTGCGGGCGCGGCTTCTCCCATGGGC
AGCACCTGGCGCGGCACCCGCGCGTGCACACGGGCGAACGGCCCTTCGCCTGCACGCAGTGTGACCGCCG
CTTCGGCTCGCGGCCTAATCTGGTCGCCCACTCCAGGGCCCACAGCGGCGCCAGGCCTTTCGCCTGCGCT
CAGTGCGGCCGCCGCTTCAGCCGCAAGTCGCACCTGGGCCGCCACCAGGCGGTGCACACTGGCAGCCGCC
CCCACGCCTGCGCCGTCTGCGCCCGCAGCTTCAGCTCCAAAACCAACCTAGTCCGCCACCAGGCGATCCA
CACAGGCTCCCGCCCCTTCTCCTGCCCGCAGTGCGGAAAGAGCTTCAGCCGCAAGACCCACCTGGTGCGG
CACCAGCTCATTCACGGCGAAGCCGCCCACGCGGCCCCGGACGCCGCCCTTGCGGCCCCAGCCTGGTCCG
CTCCCCCCGAGGTGGCGCCGCCCCCGCTCTTCTTCTGA

Translation (595 aa):
MRETLEALSSLGFSVGQPEMAPQSEPREGSHNAQEQMSSSREERALGVCSGHEAPTPEEGAHTEQAEAPC
RGQACSAQKAQPVGTCPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSLLPSPFPAPDLGHLAAAYKLEPGA
PGALSGLALSGWGPMPEKPYGCGECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHMLLHQRSH
RGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCTECEKR
FRKKTHLIRHQRIHTGERPYQCAQCARSFTHKQHLVRHQRVHQTAGPARPSPDSSASPHSTAPSPTPSFP
GPKPFACSDCGLSFGWKKNLATHQCLHRSEGRPFGCDECALGATVDAPAAKPLASAPGGPGCGPGSDPVV
PQRAPSGERSFFCPDCGRGFSHGQHLARHPRVHTGERPFACTQCDRRFGSRPNLVAHSRAHSGARPFACA
QCGRRFSRKSHLGRHQAVHTGSRPHACAVCARSFSSKTNLVRHQAIHTGSRPFSCPQCGKSFSRKTHLVR
HQLIHGEAAHAAPDAALAAPAWSAPPEVAPPPLFF


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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