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Report for CCDS59076.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59076.1 Public Homo sapiens 7 TFEC 24 110 108 CCDS HistoryNCBI Gene:22797Re-query CCDS DB by CCDS ID:59076.1Re-query CCDS DB by GeneID:22797See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 59076.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457268.5 ENSP00000387650.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457268.5Link to Ensembl Protein Viewer:ENSP00000387650.1Re-query CCDS DB by Nucleotide ID:ENST00000457268Re-query CCDS DB by Protein ID:ENSP00000387650
Original member Current member NCBI NM_001244583.2 NP_001231512.1 Accepted alive Link to Nucleotide Sequence:NM_001244583.2Link to Protein Sequence:NP_001231512.1Re-query CCDS DB by Nucleotide ID:NM_001244583Re-query CCDS DB by Protein ID:NP_001231512Link to BLAST:NP_001231512.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231512.1 280 O14948-4 280 100% 0 0

Chromosomal Locations for CCDS 59076.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 115940551 115940931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115941893 115942040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115950874 115950949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115954586 115954642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115956679 115956793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 115968185 115968250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (843 nt):
ATGATGAAGGAGAAAGAGAAAACCATTGCTATTGTGAAGGTTATAGACACTTCAAAGTTAAAACTGTTAT
CTGGAAGTATTTTGGATGTGTATAGCGGTGAACAAGGAATTTCACCAATTAACATGGGGCTTACAAGTGC
TTCTTGTCCAAGTAGTCTACCAATGAAAAGAGAAATTACAGAAACTGACACTAGAGCTTTAGCAAAAGAG
AGACAAAAAAAGGACAACCACAACCTCATTGAAAGAAGAAGAAGGTATAATATTAATTACCGAATCAAGG
AGCTTGGCACTCTTATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGAACCATTCTAAAAGC
ATCAGTGGAGTACATCAAGTGGCTACAAAAAGAACAACAGAGAGCCCGAGAATTGGAACACAGACAGAAG
AAATTAGAGCAGGCTAACAGGCGACTTCTACTTCGGATTCAGGAACTAGAAATTCAGGCTCGTACTCATG
GTCTGCCAACCCTGGCTTCACTTGGCACGGTTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCCATCC
TGAGCAGAATTCAGTAGACTATTGCCAACAACTGACTGTGTCTCAGGGGCCAAGCCCTGAGCTCTGTGAT
CAAGCTATAGCCTTTTCTGATCCTTTGTCATACTTCACAGATTTATCATTTAGTGCTGCATTGAAAGAGG
AACAAAGATTGGATGGCATGCTATTGGATGACACAATCTCTCCATTTGGAACAGATCCTCTGCTATCTGC
CACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGAGAAGTAGCTTTAGCTCAGATGATGGTGATGAATTA
TAA

Translation (280 aa):
MMKEKEKTIAIVKVIDTSKLKLLSGSILDVYSGEQGISPINMGLTSASCPSSLPMKREITETDTRALAKE
RQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQRARELEHRQK
KLEQANRRLLLRIQELEIQARTHGLPTLASLGTVDLGAHVTKQQSHPEQNSVDYCQQLTVSQGPSPELCD
QAIAFSDPLSYFTDLSFSAALKEEQRLDGMLLDDTISPFGTDPLLSATSPAVSKESSRRSSFSSDDGDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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