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Report for CCDS59136.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59136.1 Public Homo sapiens 9 ZNF484 24 110 108 CCDS HistoryNCBI Gene:83744Re-query CCDS DB by CCDS ID:59136.1Re-query CCDS DB by GeneID:83744See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 59136.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395505.6 ENSP00000378881.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395505.6Link to Ensembl Protein Viewer:ENSP00000378881.3Re-query CCDS DB by Nucleotide ID:ENST00000395505Re-query CCDS DB by Protein ID:ENSP00000378881
Original member Current member NCBI NM_001261458.3 NP_001248387.1 Accepted alive Link to Nucleotide Sequence:NM_001261458.3Link to Protein Sequence:NP_001248387.1Re-query CCDS DB by Nucleotide ID:NM_001261458Re-query CCDS DB by Protein ID:NP_001248387Link to BLAST:NP_001248387.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001248387.1 854 Q5JVG2-3 854 100% 0 0

Chromosomal Locations for CCDS 59136.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 92846228 92848551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92855811 92855903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92856192 92856318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92877820 92877840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2565 nt):
ATGTCTGTCCTGAGCCTTCCGGAATCAGTGTCATTCAAGGACGTAACTGTAGACTTCAGTAGGGATGAGT
GGCAACAATTAGACCTTGCTCAGAAAAGCCTGTACAGAGAAGTGATGCTGGAAAACTATTTCAACTTGAT
CTCAGTGGGATGTCAAGTTCCCAAACCAGAAGTCATCTTCAGCTTGGAACAAGAAGAGCCATGTATGTTG
GATGGTGAGATCCCCAGTCAGAGCCGTCCAGATGGGGACATTGGTTTTGGACCTTTACAACAGAGGATGT
CTGAAGAAGTTTCTTTCCAGTCTGAGATTAATATTAATCTCTTCACAAGAGATGACCCATATTCCATTTT
AGAAGAATTGTGGAAAGACGATGAACACACAAGAAAATGTGGAGAAAACCAGAACAAACCTTTAAGTCGT
GTTGTCTTCATTAACAAGAAAACACTAGCTAATGACAGCATCTTTGAATATAAGGACATTGGGGAAATAG
TTCATGTAAACACACACCTGGTTTCCTCAAGAAAAAGACCCCATAACTGTAACTCGTGTGGAAAGAATTT
GGAGCCTATCATAACCTTATATAATAGAAACAATGCAACAGAAAATTCTGATAAGACTATTGGAGATGGT
GATATTTTCACTCATTTGAATTCTCATACAGAAGTGACTGCTTGTGAATGTAACCAATGTGGGAAACCTC
TGCATCATAAGCAAGCTCTCATTCAACAACAGAAAATTCATACTAGAGAGAGCCTCTATTTGTTTTCTGA
CTACGTAAATGTTTTCTCCCCGAAGTCACATGCCTTTGCACATGAGAGTATTTGTGCTGAAGAAAAGCAG
CATGAATGCCATGAATGTGAGGCAGTCTTCACTCAGAAGTCCCAGCTTGATGGCAGTCAGAGGGTTTATG
CAGGAATATGCACTGAATATGAGAAGGATTTTTCCCTCAAGTCAAACCGTCAGAAAACTCCTTATGAGGG
GAATTACTATAAATGCAGTGACTATGGAAGAGCCTTTATCCAGAAGTCAGATCTGTTCAGATGCCAGAGA
ATTCATTCTGGAGAAAAACCTTATGAGTACAGTGAATGTGAGAAAAACCTCCCTCAGAATTCAAACCTTA
ATATACATAAAAAAATTCATACTGGAGGGAAACACTTTGAATGTACTGAATGTGGAAAAGCTTTCACAAG
GAAATCAACACTAAGTATGCATCAGAAAATCCATACAGGAGAAAAACCTTATGTATGTACTGAATGTGGG
AAGGCCTTTATCCGGAAGTCACATTTTATCACACATGAAAGAATTCATACTGGAGAAAAACCCTATGAAT
GCAGTGACTGTGGGAAATCCTTTATTAAAAAATCACAACTCCATGTGCATCAGCGAATTCACACAGGAGA
GAATCCCTTTATATGTTCAGAATGTGGGAAGGTCTTCACTCACAAGACAAATCTCATTATACACCAGAAA
ATTCATACAGGAGAAAGACCCTATATATGTACTGTGTGTGGTAAGGCCTTTACTGACAGGTCAAATCTCA
TTAAGCACCAAAAAATTCATACTGGAGAGAAACCTTATAAATGCAGCGACTGTGGAAAATCATTCACCTG
GAAGTCTCGGCTCAGGATACATCAGAAGTGTCATACTGGAGAGAGACATTATGAATGCAGTGAATGTGGG
AAAGCATTCATTCAGAAGTCAACATTAAGTATGCACCAGAGAATTCATAGAGGGGAAAAACCATATGTTT
GCACTGAATGTGGTAAGGCCTTCTTCCACAAATCCCATTTTATTACACATGAGAGAATTCATACTGGAGA
GAAACCCTATGAATGCAGTATTTGTGGGAAATCCTTCACTAAGAAATCACAGCTCCACGTACATCAGCAG
ATTCACACAGGAGAGAAACCCTATAGGTGTGCTGAATGTGGAAAGGCTTTTACTGACAGATCAAATCTCT
TTACACACCAGAAAATTCACACTGGAGAGAAACCTTATAAATGTAGTGACTGTGGGAAAGCCTTCACTAG
GAAGTCAGGTCTCCATATACATCAGCAATCCCATACTGGAGAAAGGCATTATGAGTGCAGTGAATGTGGG
AAAGCCTTTGCAAGAAAATCAACACTAATTATGCATCAGAGAATTCATACAGGAGAGAAACCCTATATTT
GTAATGAATGTGGGAAATCCTTCATCCAGAAGTCACACTTAAATAGACACAGGAGAATTCATACTGGAGA
GAAACCCTATGAATGCAGTGACTGTGGCAAGTCTTTCATTAAGAAATCACAACTCCATGAGCATCATCGA
ATTCACACAGGAGAGAAACCATATATATGTGCTGAGTGTGGAAAGGCCTTCACCATCAGATCAAATCTTA
TTAAACACCAGAAAATTCATACTAAACAGAAACCCTATAAGTGCAGTGACTTGGGGAAAGCCTTAAACTG
GAAGCCACAACTCAGTATGCCTCAGAAATCTGACAATGGGGAAGTAGAGTGCTCCATGCCACAATTATGG
TGTGGGGACTCAGAAGGTGACCAAGGCCAACTTTCTTCTATCTAG

Translation (854 aa):
MSVLSLPESVSFKDVTVDFSRDEWQQLDLAQKSLYREVMLENYFNLISVGCQVPKPEVIFSLEQEEPCML
DGEIPSQSRPDGDIGFGPLQQRMSEEVSFQSEININLFTRDDPYSILEELWKDDEHTRKCGENQNKPLSR
VVFINKKTLANDSIFEYKDIGEIVHVNTHLVSSRKRPHNCNSCGKNLEPIITLYNRNNATENSDKTIGDG
DIFTHLNSHTEVTACECNQCGKPLHHKQALIQQQKIHTRESLYLFSDYVNVFSPKSHAFAHESICAEEKQ
HECHECEAVFTQKSQLDGSQRVYAGICTEYEKDFSLKSNRQKTPYEGNYYKCSDYGRAFIQKSDLFRCQR
IHSGEKPYEYSECEKNLPQNSNLNIHKKIHTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPYVCTECG
KAFIRKSHFITHERIHTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPFICSECGKVFTHKTNLIIHQK
IHTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHYECSECG
KAFIQKSTLSMHQRIHRGEKPYVCTECGKAFFHKSHFITHERIHTGEKPYECSICGKSFTKKSQLHVHQQ
IHTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHYECSECG
KAFARKSTLIMHQRIHTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPYECSDCGKSFIKKSQLHEHHR
IHTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPYKCSDLGKALNWKPQLSMPQKSDNGEVECSMPQLW
CGDSEGDQGQLSSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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