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Report for CCDS59198.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59198.1 Public Homo sapiens 1 RBM15 24 110 108 CCDS HistoryNCBI Gene:64783Re-query CCDS DB by CCDS ID:59198.1Re-query CCDS DB by GeneID:64783See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59198.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000487146.8 ENSP00000473552.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000487146.8Link to Ensembl Protein Viewer:ENSP00000473552.3Re-query CCDS DB by Nucleotide ID:ENST00000487146Re-query CCDS DB by Protein ID:ENSP00000473552
Original member Current member EBI ENST00000652747.1 ENSP00000498634.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000652747.1Link to Ensembl Protein Viewer:ENSP00000498634.1Re-query CCDS DB by Nucleotide ID:ENST00000652747Re-query CCDS DB by Protein ID:ENSP00000498634
Original member Current member NCBI NM_001201545.2 NP_001188474.1 Accepted alive Link to Nucleotide Sequence:NM_001201545.2Link to Protein Sequence:NP_001188474.1Re-query CCDS DB by Nucleotide ID:NM_001201545Re-query CCDS DB by Protein ID:NP_001188474Link to BLAST:NP_001188474.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001188474.1 969 Q96T37-3 969 100% 0 0

Chromosomal Locations for CCDS 59198.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 110339406 110342268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 110346308 110346354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2910 nt):
ATGAGGACTGCGGGGCGGGACCCTGTGCCGCGGCGGAGTCCAAGATGGCGGCGTGCGGTTCCGCTGTGTG
AAACGAGCGCGGGGCGGCGGGTTACTCAGCTCCGCGGAGACGACCTCCGACGACCCGCAACAATGAAGGG
AAAAGAGCGCTCGCCAGTGAAGGCCAAACGCTCCCGTGGTGGTGAGGACTCGACTTCCCGCGGTGAGCGG
AGCAAGAAGTTAGGGGGCTCTGGTGGCAGCAATGGGAGCAGCAGCGGAAAGACCGATAGCGGCGGTGGGT
CGCGGCGGAGTCTCCACCTGGACAAGTCCAGCAGTCGAGGTGGCAGCCGCGAGTATGATACCGGTGGGGG
CAGCTCCAGTAGCCGCTTGCATAGTTATAGCTCCCCGAGCACCAAAAATTCTTCGGGCGGGGGCGAATCG
CGCAGCAGCTCCCGGGGTGGAGGCGGGGAGTCACGTTCCTCTGGGGCCGCCTCCTCAGCTCCCGGCGGCG
GGGACGGCGCGGAATACAAGACTCTGAAGATAAGCGAGTTGGGGTCCCAGCTTAGTGACGAAGCGGTGGA
GGACGGCCTGTTTCATGAGTTCAAACGCTTCGGTGATGTAAGTGTGAAAATCAGTCATCTGTCGGGTTCT
GGCAGCGGGGATGAGCGGGTAGCCTTTGTGAACTTCCGGCGGCCAGAGGACGCGCGGGCGGCCAAGCATG
CCAGAGGCCGCCTGGTGCTCTATGACCGGCCTCTGAAGATAGAAGCTGTGTATGTGAGCCGGCGCCGCAG
CCGCTCCCCTTTAGACAAAGATACTTATCCTCCATCAGCCAGTGTGGTCGGGGCCTCTGTAGGTGGTCAC
CGGCACCCCCCTGGAGGTGGTGGAGGCCAGAGATCACTTTCCCCTGGTGGCGCTGCTTTGGGATACAGAG
ACTACCGGCTGCAGCAGTTGGCTCTTGGCCGCCTGCCCCCTCCACCTCCGCCACCATTGCCTCGAGACCT
GGAGAGAGAAAGAGACTACCCGTTCTATGAGAGAGTGCGCCCTGCATACAGTCTTGAGCCAAGGGTGGGA
GCTGGAGCAGGTGCTGCTCCTTTCAGAGAAGTGGATGAGATTTCACCCGAGGATGATCAGCGAGCTAACC
GGACGCTCTTCTTGGGCAACCTAGACATCACTGTAACGGAGAGTGATTTAAGAAGGGCGTTTGATCGCTT
TGGAGTCATCACAGAAGTAGATATCAAGAGGCCTTCTCGCGGCCAGACTAGTACTTACGGCTTTCTCAAA
TTTGAGAACTTAGATATGTCTCACCGGGCCAAATTAGCAATGTCTGGCAAAATTATAATTCGGAATCCTA
TCAAAATTGGTTATGGTAAAGCTACACCCACCACCCGCCTCTGGGTGGGAGGCCTGGGACCTTGGGTTCC
TCTTGCTGCCCTGGCACGAGAATTTGATCGATTTGGCACCATACGCACCATAGACTACCGAAAAGGTGAT
AGTTGGGCATATATCCAGTATGAAAGCCTGGATGCAGCGCATGCTGCCTGGACCCATATGCGGGGCTTCC
CACTTGGTGGCCCAGATCGACGCCTTAGAGTAGACTTTGCCGACACCGAACATCGTTACCAGCAGCAGTA
TCTGCAGCCTCTGCCCTTGACTCATTATGAGCTGGTGACAGATGCTTTTGGACATCGGGCACCAGACCCT
TTGAGGGGTGCTCGGGATAGGACACCACCCTTACTATACAGAGATCGTGATAGGGACCTTTATCCTGACT
CTGATTGGGTGCCACCCCCACCCCCAGTCCGAGAACGCAGCACTCGGACTGCAGCTACTTCTGTGCCTGC
TTACGAGCCACTGGATAGCCTAGATCGCAGGCGGGATGGTTGGTCCTTGGACCGGGACAGAGGTGATCGA
GATCTGCCCAGCAGCAGAGACCAGCCTAGGAAGCGAAGGCTGCCTGAGGAGAGTGGAGGACGTCATCTGG
ATAGGTCTCCTGAGAGTGACCGCCCACGAAAACGTCACTGCGCTCCTTCTCCTGACCGCAGTCCAGAATT
GAGCAGTAGCCGGGATCGTTACAACAGCGACAATGATCGATCTTCCCGTCTTCTCTTGGAAAGGCCCTCT
CCAATCAGAGACAGACGAGGTAGTTTGGAGAAGAGCCAGGGTGACAAGCGAGACCGTAAAAACTCTGCAT
CAGCTGAACGAGATAGGAAGCACCGGACAACTGCTCCCACTGAGGGAAAAAGCCCTCTGAAAAAAGAAGA
CCGCTCTGATGGGAGTGCACCTAGCACCAGCACTGCTTCCTCCAAGCTGAAGTCCCCGTCCCAGAAACAG
GATGGGGGGACAGCCCCTGTGGCATCAGCCTCTCCCAAACTCTGTTTGGCCTGGCAGGGCATGCTTCTAC
TGAAGAACAGCAACTTTCCTTCCAACATGCATCTGTTGCAGGGTGACCTCCAAGTGGCTAGTAGTCTTCT
TGTGGAGGGTTCAACTGGAGGCAAAGTGGCCCAGCTCAAGATCACTCAGCGTCTCCGTTTGGACCAGCCC
AAGTTGGATGAAGTAACTCGACGCATCAAAGTAGCAGGGCCCAATGGTTATGCCATTCTTTTGGCTGTGC
CTGGAAGTTCTGACAGCCGGTCCTCCTCTTCCTCAGCTGCATCAGACACTGCCACTTCTACTCAGAGGCC
ACTTAGGAACCTTGTGTCCTATTTAAAGCAAAAGCAGGCAGCCGGGGTGATCAGCCTCCCTGTGGGGGGC
AACAAAGACAAGGAAAACACCGGGGTCCTTCATGCCTTCCCACCTTGTGAGTTCTCCCAGCAGTTCCTGG
ATTCCCCTGCCAAGGCACTGGCCAAATCTGAAGAAGATTACCTGGTCATGATCATTGTCCGTGCAAAACT
GGTTGAACAGCGGATGAAGATATGGAATTCAAAGCTCTAA

Translation (969 aa):
MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRGGEDSTSRGER
SKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSSSRLHSYSSPSTKNSSGGGES
RSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGS
GSGDERVAFVNFRRPEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGH
RHPPGGGGGQRSLSPGGAALGYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVG
AGAGAAPFREVDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK
FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGD
SWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQPLPLTHYELVTDAFGHRAPDP
LRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLDSLDRRRDGWSLDRDRGDR
DLPSSRDQPRKRRLPEESGGRHLDRSPESDRPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPS
PIRDRRGSLEKSQGDKRDRKNSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQ
DGGTAPVASASPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP
KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAGVISLPVGG
NKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRAKLVEQRMKIWNSKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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