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Report for CCDS59266.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59266.1 Public Homo sapiens 16 XPO6 24 110 108 CCDS HistoryNCBI Gene:23214Re-query CCDS DB by CCDS ID:59266.1Re-query CCDS DB by GeneID:23214See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59266.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000565698.5 ENSP00000457341.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565698.5Link to Ensembl Protein Viewer:ENSP00000457341.1Re-query CCDS DB by Nucleotide ID:ENST00000565698Re-query CCDS DB by Protein ID:ENSP00000457341
Original member Current member NCBI NM_001270940.2 NP_001257869.1 Accepted alive Link to Nucleotide Sequence:NM_001270940.2Link to Protein Sequence:NP_001257869.1Re-query CCDS DB by Nucleotide ID:NM_001270940Re-query CCDS DB by Protein ID:NP_001257869Link to BLAST:NP_001257869.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257869.1 1111 Q96QU8-2 1111 100% 0 0

Chromosomal Locations for CCDS 59266.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 28098538 28098639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28101458 28101688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28101847 28101945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28104546 28104707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28106043 28106214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28106383 28106497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28107522 28107677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28111817 28112006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28112904 28113050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28117318 28117462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28121670 28121762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28125689 28125848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28132334 28132403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28133841 28133933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28135216 28135324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28146094 28146203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28152659 28152785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28156074 28156527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28166508 28166585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28169750 28169909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28175898 28176095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28177220 28177332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28180941 28180992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3336 nt):
ATGACAGAATTTTTTCACGATTGTACAACCAATGAAAGAAAACGTGAGATAGAGGAGCTTCTTAATAACT
TTGCCCAGCAAATAGGAGCCTGGAGATTCTGCCTGTACTTTCTCTCCAGCACTAGGAATGACTATGTAAT
GATGTACAGTTTAACAGTTTTTGAGAATCTGATCAATAAAATGTGGCTTGGGGTCCCATCTCAGGATAAG
ATGGAAATCCGTAGCTGTCTGCCCAAACTCCTTTTGGCTCACCATAAAACCTTACCTTACTTTATCCGGA
ACAAGCTCTGCAAAGTTATTGTTGATATTGGACGTCAGGATTGGCCCATGTTCTACCACGACTTTTTTAC
TAACATTTTACAGTTGATCCAGTCCCCTGTGACAACCCCCCTTGGGCTGATCATGTTGAAGACAACTTCA
GAAGAGCTGGCTTGTCCCCGTGAGGACCTCAGTGTGGCTCGGAAGGAGGAGTTGCGGAAGCTGCTACTGG
ACCAGGTGCAGACAGTGCTTGGGCTACTGACAGGTATCTTGGAGACTGTCTGGGACAAACACAGTGTTAC
TGCTGCCACTCCACCACCATCCCCGACCTCAGGAGAAAGTGGTGACTTACTGAGTAACCTGTTGCAGAGT
CCCAGTTCAGCCAAACTGTTGAATCAGCCAATTCCCATCCTTGATGTGGAGAGTGAGTATATCTGTTCCC
TGGCTTTGGAGTGCCTGGCCCATCTCTTCAGTTGGATTCCTCTGTCTGCCAGCATCACCCCATCCCTCCT
TACCACCATCTTCCACTTTGCACGATTTGGCTGTGACATCCGGGCCAGAAAGATGGCGTCAGTTAACGGC
AGCAGCCAGAACTGTGTCTCGGGTCAGGAGCGCGGCCGGCTGGGGGTCCTGGCCATGTCCTGCATCAATG
AACTCATGTCCAAGAACTGTGTGCCTATGGAATTTGAGGAGTATTTACTGCGTATGTTCCAGCAGACTTT
CTACCTCCTGCAGAAAATCACCAAGGATAACAATGCCCACACAGTGAAGAGCAGGCTAGAAGAGCTCGAT
GAGAGCTATATCGAGAAGTTTACTGACTTTCTTCGGCTCTTTGTGAGTGTTCACCTAAGAAGAATCGAGT
CTTACTCCCAGTTCCCTGTGGTGGAGTTTTTGACACTTTTGTTCAAGTACACATTTCATCAGCCTACTCA
TGAAGGTTACTTCTCTTGTTTGGATATCTGGACGCTGTTTTTGGACTATCTGACAAGTAAAATTAAAAGT
CGTCTTGGAGACAAGGAAGCAGTTCTCAACAGGTACGAAGATGCCCTGGTGCTCCTGCTCACAGAGGTGT
TGAATCGAATCCAGTTCAGATACAACCAAGCCCAGCTGGAGGAGTTGGATGATGAGACTCTGGATGACGA
TCAGCAGACGGAGTGGCAGCGGTACTTACGGCAGAGCTTGGAGGTGGTGGCCAAAGTGATGGAGCTCCTG
CCCACGCACGCCTTCTCCACACTGTTCCCTGTTCTTCAGGACAATTTAGAAGTTTATTTGGGATTACAAC
AGTTTATAGTCACTTCAGGGTCAGGACACAGGTTGAACATCACGGCGGAGAACGACTGCCGGCGGCTGCA
CTGCTCCCTGAGAGACTTGAGCTCCCTGCTGCAGGCCGTGGGCCGCCTGGCCGAGTACTTTATCGGGGAT
GTGTTTGCTGCACGGTTCAATGATGCCCTCACAGTCGTGGAAAGGTTGGTCAAAGTCACTCTGTACGGAT
CTCAGATAAAATTGTACAACATTGAAACTGCTGTGCCATCAGTATTGAAACCTGACCTCATTGATGTGCA
TGCTCAGTCCCTGGCTGCGCTGCAGGCTTACTCTCACTGGTTAGCACAGTATTGCAGTGAAGTTCACCGG
CAGAACACGCAGCAGTTCGTGACACTCATCTCTACTACCATGGATGCAATCACACCTCTAATCAGCACCA
AGGTCCAAGACAAGCTGCTGCTATCTGCGTGCCACTTACTGGTCTCACTGGCCACCACCGTGCGGCCCGT
CTTTCTGATCAGCATCCCTGCAGTGCAGAAAGTATTCAACAGAATCACTGATGCCTCTGCCCTGCGACTT
GTCGATAAGGCCCAGGTGTTGGTGTGCCGAGCCCTCTCTAACATCTTGCTGCTTCCGTGGCCAAACCTTC
CAGAGAATGAGCAGCAGTGGCCCGTGCGCTCCATCAACCACGCCAGCCTCATCTCTGCACTCTCCCGGGA
CTATCGCAACCTGAAGCCCAGTGCTGTTGCCCCACAGAGAAAGATGCCACTGGATGACACCAAACTGATT
ATCCACCAGACACTCAGCGTCTTAGAAGATATTGTGGAGAATATCTCGGGGGAGTCCACCAAGTCTCGAC
AGATTTGCTACCAGTCGCTGCAGGAATCTGTTCAGGTCTCCCTGGCCCTCTTTCCAGCTTTTATCCATCA
GTCAGATGTGACTGATGAGATGCTGAGCTTCTTCCTCACTCTGTTTCGAGGCCTTAGAGTACAGATGGGT
GTGCCTTTCACTGAGCAAATCATACAGACTTTCCTCAACATGTTTACCAGAGAGCAGTTAGCCGAGAGCA
TCCTCCACGAGGGCAGCACAGGCTGCCGGGTGGTGGAGAAGTTTCTGAAGATCCTGCAGGTGGTGGTCCA
GGAGCCAGGCCAGGTGTTCAAGCCCTTCCTCCCCAGCATCATCGCCCTGTGCATGGAGCAAGTGTATCCC
ATCATTGCCGAGCGTCCCTCCCCTGATGTGAAGGCCGAGCTGTTTGAGCTCCTTTTCCGGACGCTCCATC
ACAACTGGAGGTACTTCTTCAAGTCCACCGTGCTGGCCAGTGTCCAGAGGGGGATCGCTGAGGAGCAGAT
GGAGAATGAGCCCCAGTTCAGTGCCATCATGCAGGCTTTCGGACAGTCCTTTCTCCAGCCCGACATCCAC
CTTTTTAAACAAAATCTCTTCTACTTGGAGACTCTCAACACCAAGCAGAAGCTGTACCACAAGAAGATCT
TCCGGACTGCCATGCTGTTCCAGTTTGTGAACGTGCTGCTCCAGGTCCTGGTCCACAAGTCCCATGATCT
TCTGCAGGAGGAGATTGGCATCGCCATCTACAACATGGCCTCAGTCGACTTTGATGGCTTCTTTGCCGCC
TTCCTCCCAGAGTTCCTGACCAGCTGTGATGGTGTGGATGCCAACCAGAAAAGTGTGCTGGGGCGGAATT
TCAAGATGGATCGGGACCTGCCCTCATTCACCCAGAATGTGCACAGGCTGGTCAACGACCTGCGCTACTA
CAGACTCTGCAACGACAGCCTGCCCCCTGGCACTGTGAAGCTCTAG

Translation (1111 aa):
MTEFFHDCTTNERKREIEELLNNFAQQIGAWRFCLYFLSSTRNDYVMMYSLTVFENLINKMWLGVPSQDK
MEIRSCLPKLLLAHHKTLPYFIRNKLCKVIVDIGRQDWPMFYHDFFTNILQLIQSPVTTPLGLIMLKTTS
EELACPREDLSVARKEELRKLLLDQVQTVLGLLTGILETVWDKHSVTAATPPPSPTSGESGDLLSNLLQS
PSSAKLLNQPIPILDVESEYICSLALECLAHLFSWIPLSASITPSLLTTIFHFARFGCDIRARKMASVNG
SSQNCVSGQERGRLGVLAMSCINELMSKNCVPMEFEEYLLRMFQQTFYLLQKITKDNNAHTVKSRLEELD
ESYIEKFTDFLRLFVSVHLRRIESYSQFPVVEFLTLLFKYTFHQPTHEGYFSCLDIWTLFLDYLTSKIKS
RLGDKEAVLNRYEDALVLLLTEVLNRIQFRYNQAQLEELDDETLDDDQQTEWQRYLRQSLEVVAKVMELL
PTHAFSTLFPVLQDNLEVYLGLQQFIVTSGSGHRLNITAENDCRRLHCSLRDLSSLLQAVGRLAEYFIGD
VFAARFNDALTVVERLVKVTLYGSQIKLYNIETAVPSVLKPDLIDVHAQSLAALQAYSHWLAQYCSEVHR
QNTQQFVTLISTTMDAITPLISTKVQDKLLLSACHLLVSLATTVRPVFLISIPAVQKVFNRITDASALRL
VDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISALSRDYRNLKPSAVAPQRKMPLDDTKLI
IHQTLSVLEDIVENISGESTKSRQICYQSLQESVQVSLALFPAFIHQSDVTDEMLSFFLTLFRGLRVQMG
VPFTEQIIQTFLNMFTREQLAESILHEGSTGCRVVEKFLKILQVVVQEPGQVFKPFLPSIIALCMEQVYP
IIAERPSPDVKAELFELLFRTLHHNWRYFFKSTVLASVQRGIAEEQMENEPQFSAIMQAFGQSFLQPDIH
LFKQNLFYLETLNTKQKLYHKKIFRTAMLFQFVNVLLQVLVHKSHDLLQEEIGIAIYNMASVDFDGFFAA
FLPEFLTSCDGVDANQKSVLGRNFKMDRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTVKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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