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Report for CCDS59380.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59380.1 Public Homo sapiens 19 ZNF829 24 110 108 CCDS HistoryNCBI Gene:374899Re-query CCDS DB by CCDS ID:59380.1Re-query CCDS DB by GeneID:374899See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59380.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520965.5 ENSP00000428679.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520965.5Link to Ensembl Protein Viewer:ENSP00000428679.2Re-query CCDS DB by Nucleotide ID:ENST00000520965Re-query CCDS DB by Protein ID:ENSP00000428679
Original member Current member NCBI NM_001171979.2 NP_001165450.1 Accepted alive Link to Nucleotide Sequence:NM_001171979.2Link to Protein Sequence:NP_001165450.1Re-query CCDS DB by Nucleotide ID:NM_001171979Re-query CCDS DB by Protein ID:NP_001165450Link to BLAST:NP_001165450.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001165450.1 513 Q3KNS6-3 513 100% 0 0

Chromosomal Locations for CCDS 59380.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36891492 36892471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36907929 36908024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36908333 36908459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36914965 36915022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36915130 36915251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36915796 36915954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1542 nt):
ATGACTGGAAAGGGCTTAGGTGAGGATACCGAAGACCGATGGGGAGCTGGCGCCTTGGGCCCCTGCGGGC
GGAGCGGCCTGAAAGGTGGAGGTTGTGTTTGGGAGGCCGAGGCAGGAGGATCACGAGGTCAAGAGATCGA
GACCATCCTGGCCAACATGGAAACCTCTCTGAGGTCTGGTCAGATTCCAACCCTGGACAGCAGTGAACAC
AACCTTTCCCCTGAGCCACTGGAATTGGACAGAATGCCCCATTCTCCTCTGATCTCCATTCCTCATGTGT
GGTGTCACCCAGAAGAGGAGGAAAGAATGCATGATGAACTTCTACAAGCAGTATCCAAGGGGCCGGTGAT
GTTCAGGGATGTTTCCATAGACTTCTCTCAAGAGGAATGGGAATGCCTGGACGCTGATCAGATGAATTTA
TACAAAGAAGTGATGTTGGAGAATTTCAGCAACCTGGTTTCAGTGGGACTTTCCAATTCTAAGCCAGCTG
TGATCTCCTTATTGGAACAAGGAAAAGAGCCCTGGATGGTTGATAGAGAGCTGACTAGAGGCCTGTGTTC
AGATCTGGAATCAATGTGTGAGACCAAAATATTATCTCTAAAGAAGAGACATTTCAGTCAAGTAATAATT
ACCCGTGAAGACATGTCTACTTTTATTCAGCCCACATTTCTTATTCCACCTCAAAAAACTATGAGTGAAG
AGAAACCATGGGAATGTAAGATATGTGGAAAGACCTTTAATCAAAACTCACAATTTATCCAACATCAGAG
AATTCATTTTGGTGAAAAACACTATGAATCTAAGGAGTATGGGAAGTCCTTTAGTCGTGGCTCACTCGTT
ACTCGACATCAGAGGATTCACACTGGTAAAAAACCCTATGAATGTAAGGAATGTGGCAAGGCTTTTAGTT
GTAGTTCATATTTTTCTCAACATCAGAGGATTCACACTGGTGAGAAACCCTATGAATGTAAGGAATGTGG
AAAAGCCTTTAAGTATTGCTCAAACCTTAATGATCATCAGAGAATTCACACTGGTGAGAAACCCTATGAA
TGTAAAGTATGTGGAAAAGCCTTTACTAAAAGTTCACAACTTTTTCTACATCTGAGAATTCATACTGGTG
AGAAACCTTATGAATGTAAAGAATGTGGGAAAGCCTTTACTCAACACTCAAGGCTTATTCAGCATCAGAG
AATGCATACTGGTGAGAAACCTTATGAATGTAAGCAGTGTGGGAAGGCCTTTAATAGTGCCTCAACACTT
ACTAACCATCACAGAATTCATGCTGGTGAGAAGCTCTATGAATGTGAAGAATGTAGAAAGGCCTTTATTC
AGAGCTCAGAACTTATTCAACATCAGAGAATCCATACAGATGAAAAACCATATGAATGTAATGAATGTGG
GAAGGCCTTTAATAAAGGCTCAAATCTTACTCGACATCAGAGAATTCACACTGGTGAGAAACCCTATGAC
TGTAAGGAATGTGGAAAGGCTTTTGGTAGTCGCTCTGACCTCATTCGCCATGAGGGAATTCATACTGGTT
GA

Translation (513 aa):
MTGKGLGEDTEDRWGAGALGPCGRSGLKGGGCVWEAEAGGSRGQEIETILANMETSLRSGQIPTLDSSEH
NLSPEPLELDRMPHSPLISIPHVWCHPEEEERMHDELLQAVSKGPVMFRDVSIDFSQEEWECLDADQMNL
YKEVMLENFSNLVSVGLSNSKPAVISLLEQGKEPWMVDRELTRGLCSDLESMCETKILSLKKRHFSQVII
TREDMSTFIQPTFLIPPQKTMSEEKPWECKICGKTFNQNSQFIQHQRIHFGEKHYESKEYGKSFSRGSLV
TRHQRIHTGKKPYECKECGKAFSCSSYFSQHQRIHTGEKPYECKECGKAFKYCSNLNDHQRIHTGEKPYE
CKVCGKAFTKSSQLFLHLRIHTGEKPYECKECGKAFTQHSRLIQHQRMHTGEKPYECKQCGKAFNSASTL
TNHHRIHAGEKLYECEECRKAFIQSSELIQHQRIHTDEKPYECNECGKAFNKGSNLTRHQRIHTGEKPYD
CKECGKAFGSRSDLIRHEGIHTG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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