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Report for CCDS59391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59391.1 Public Homo sapiens 19 DEDD2 24 110 108 CCDS HistoryNCBI Gene:162989Re-query CCDS DB by CCDS ID:59391.1Re-query CCDS DB by GeneID:162989See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336034.8 ENSP00000336972.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336034.8Link to Ensembl Protein Viewer:ENSP00000336972.4Re-query CCDS DB by Nucleotide ID:ENST00000336034Re-query CCDS DB by Protein ID:ENSP00000336972
Original member Current member NCBI NM_001270615.2 NP_001257544.1 Accepted alive Link to Nucleotide Sequence:NM_001270615.2Link to Protein Sequence:NP_001257544.1Re-query CCDS DB by Nucleotide ID:NM_001270615Re-query CCDS DB by Protein ID:NP_001257544Link to BLAST:NP_001257544.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257544.1 321 Q8WXF8-2 321 100% 0 0

Chromosomal Locations for CCDS 59391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 42199438 42199829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42209700 42209840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42215148 42215252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42216680 42217007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGGCGCTATCCGGGTCGACCCCGGCCCCGTGCTGGGAGGAGGATGAGTGCCTGGACTACTACGGGATGC
TGTCGCTTCACCGTATGTTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGAGCTGGAGCTCCTGGCCTT
TCTGCTGGATGAGGCTCCTGGCGCCGCCGGAGGCTTAGCCCGGGCCCGCAGCGGCCTAGAGCTCCTGCTG
GAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTGG
CCCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCGGCGCCGGCCAGTGTCTCCAGAACGCTATAGCTA
TGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCA
AATTCTCAGCAGGGCTCCCCCCCAACCAAGCGGCAGCGGCGGAGTCGGGGCCGGCCCAGTGGTGGTGCCA
GACGGCGGCGGAGAGGGGCCCCAGCCGCACCCCAGCAGCAGTCAGAGCCCGCCAGACCTTCCTCTGAAGG
CAAAGTGACCTGTGACATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAG
GGCGTGGCATCCCGGCGGCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGC
TGCGCTCAAGGGACCTGGGCTCTGTGGTTTGTGACATCAAGTTCTCAGAGCTCTCCTATCTGGACGCCTT
CTGGGGCGACTACCTGAGTGGCGCCCTGCTGCAGGCCCTGCGGGGCGTGTTCCTGACTGAGGCCCTGCGA
GAGGCTGTGGGCCGGGAGGCTGTTCGCCTGCTGGTCAGTGTGGATGAGGCTGACTATGAGGCTGGCCGGC
GCCGCCTGTTGCTGATGGAGGAGGAAGGGGGGCGGCGCCCGACAGAGGCCTCCTGA

Translation (321 aa):
MALSGSTPAPCWEEDECLDYYGMLSLHRMFEVVGGQLTECELELLAFLLDEAPGAAGGLARARSGLELLL
ELERRGQCDESNLRLLGQLLRVLARHDLLPHLARKRRRPVSPERYSYGTSSSSKRTEGSCRRRRQSSSSA
NSQQGSPPTKRQRRSRGRPSGGARRRRRGAPAAPQQQSEPARPSSEGKVTCDIRLRVRAEYCEHGPALEQ
GVASRRPQALARQLDVFGQATAVLRSRDLGSVVCDIKFSELSYLDAFWGDYLSGALLQALRGVFLTEALR
EAVGREAVRLLVSVDEADYEAGRRRLLLMEEEGGRRPTEAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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