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Report for CCDS59445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59445.1 Public Homo sapiens 21 CFAP410 24 110 108 CCDS HistoryNCBI Gene:755Re-query CCDS DB by CCDS ID:59445.1Re-query CCDS DB by GeneID:755See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325223.7 ENSP00000317302.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000325223.7Link to Ensembl Protein Viewer:ENSP00000317302.7Re-query CCDS DB by Nucleotide ID:ENST00000325223Re-query CCDS DB by Protein ID:ENSP00000317302
Original member Current member NCBI NM_001271440.2 NP_001258369.1 Accepted alive Link to Nucleotide Sequence:NM_001271440.2Link to Protein Sequence:NP_001258369.1Re-query CCDS DB by Nucleotide ID:NM_001271440Re-query CCDS DB by Protein ID:NP_001258369Link to BLAST:NP_001258369.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258369.1 255 O43822-3 255 100% 0 0

Chromosomal Locations for CCDS 59445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44330198 44330326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44330823 44330916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44331843 44332014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44333033 44333262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44335758 44335804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44337649 44337667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44339118 44339194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGAAGCTGACGCGGAAGATGGTTCTGACCCGGGCCAAGGCCTCGGAGCTGCACAGCGTGCGCAAGCTCA
ACTGCTGGGGCAGCCGCCTCACAGATATCTCCATTTGCCAGGAGATGCCCAGCCTGGAGGTGATCACGCT
CAGTGTCAACAGCATCTCCACCCTGGAGCCTGTGAGCCGGTGCCAGCGCCTGAGTGAGCTGTACCTGCGG
AGGAACCGCATCCCCAGCCTGGCTGAGCTCTTCTACCTGAAGGGGCTGCCGCGTCTGCGGGTGCTGTGGC
TGGCCGAGAACCCGTGCTGCGGCACCAGCCCCCACCGCTACCGCATGACCGTGCTGCGCACCCTGCCGCG
CCTACAGAAGCTGGACAACCAGGCTGTGACGGAGGAGGAGCTGTCCCGTGCACTGAGTGAGGGAGAGGAG
ATCACTGCGGCCCCAGAGAGAGAGGGCACAGGCCACGGCGGCCCCAAGCTATGCTGCACACTGAGCTCCC
TCAGCTCCGCTGCTGAGACTGGCCGGGACCCGCTGGACAGCGAGGAGGAGGCAACCGGCGCCCAGGATGA
ACGTGGCCTGAAGCCGCCTTCCCGGGGCCAGTTTCCTTCCCTCTCAGCCAGGGATGCCTCGAGCAGCCAC
AGGGGCAGGAACGTCCTGACTGCCATCCTGCTGCTGCTGCGGGAGCTGGATGCAGAGGGGCTGGAGGCCG
TGCAGCAGACTGTGGGCAGCCGGCTGCAGGCCCTGCGTGGGGAAGAGGTGCAGGAGCACGCCGAGTGA

Translation (255 aa):
MKLTRKMVLTRAKASELHSVRKLNCWGSRLTDISICQEMPSLEVITLSVNSISTLEPVSRCQRLSELYLR
RNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQAVTEEELSRALSEGEE
ITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATGAQDERGLKPPSRGQFPSLSARDASSSH
RGRNVLTAILLLLRELDAEGLEAVQQTVGSRLQALRGEEVQEHAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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