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Report for CCDS60034.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60034.1 Public Homo sapiens 1 MACO1 24 110 108 CCDS HistoryNCBI Gene:55219Re-query CCDS DB by CCDS ID:60034.1Re-query CCDS DB by GeneID:55219See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 60034.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399766.7 ENSP00000382668.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399766.7Link to Ensembl Protein Viewer:ENSP00000382668.3Re-query CCDS DB by Nucleotide ID:ENST00000399766Re-query CCDS DB by Protein ID:ENSP00000382668
Original member Current member NCBI NM_001282564.2 NP_001269493.1 Accepted alive Link to Nucleotide Sequence:NM_001282564.2Link to Protein Sequence:NP_001269493.1Re-query CCDS DB by Nucleotide ID:NM_001282564Re-query CCDS DB by Protein ID:NP_001269493Link to BLAST:NP_001269493.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269493.1 437 Q8N5G2-3 437 100% 0 0

Chromosomal Locations for CCDS 60034.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 25431099 25431178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25446762 25446903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25448808 25448934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25454259 25454382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25484116 25484274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25485613 25485795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25489173 25489293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25491410 25491584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25498264 25498466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1314 nt):
ATGAAGCGGCGGAACGCCGACTGCAGTAAGCTCCGCCGCCCCCTAAAGCGGAACCGGATCACCGAGGGCA
TTTACGGCAGTACATTTTTATACCTGAAATTCCTGGTGGTGTGGGCACTTGTCCTCCTAGCAGATTTTGT
CCTGGAGTTCAGATTTGAATACCTGTGGCCATTCTGGCTTTTCATCAGAAGCGTCTATGATTCCTTCAGA
TACCAGGGACTGGCCTTCTCAGTATTTTTTGTTTGTGTAGCATTCACGTCAAATATAATATGCCTGCTGT
TCATCCCCATACAGTGGCTTTTTTTTGCTGCTAGCACATATGTATGGGTTCAGTACGTATGGCACACAGA
AAGGGGAGTGTGTTTGCCTACAGTGTCTCTCTGGATCCTCTTTGTTTATATTGAAGCAGCCATTAGATTT
AAAGATCTCAAAAACTTTCATGTAGACCTTTGTCGTCCATTTGCTGCTCACTGGCTGGAACAAGACATTA
AAAAGTTAAAGGCTGACCTGCAAGCCAGCAGACAAGTGGAACAAGAGCTCCGCAGTCAGATCAGCTCCCT
TTCGAGCACCGAGCGAGGGATCCGCTCAGAAATGGGCCAGCTTCGGCAGGAGAACGAGCTGCTGCAGAAC
AAGTTACATAATGCTGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGTTGGAGAAAAAGCTAA
AAGCTGAGCAGGAAGCCCGAAGTTTTGTAGAGAAACAGTTAATGGAAGAGAAAAAGAGGAAGAAGTTAGA
AGAAGCCACTGCTGCCCGGGCTGTTGCGTTTGCTGCTGCATCTAGGGGAGAATGCACCGAAACCTTACGG
AATCGGATCAGAGAACTAGAAGCAGAGGGCAAGAAGCTCACGATGGACATGAAGGTGAAAGAAGACCAAA
TCAGAGAACTAGAACTAAAAGTCCAGGAGCTTCGGAAATATAAGGAAAATGAGAAGGACACTGAGGTGTT
AATGTCAGCCCTCTCAGCCATGCAAGACAAAACACAGCACCTGGAGAACAGCTTAAGTGCAGAGACGAGA
ATCAAGCTGGACCTGTTCTCCGCACTGGGCGATGCAAAGCGGCAGCTCGAGATTGCCCAAGGACAAATCC
TTCAGAAAGATCAGGAAATCAAGGACCTAAAACAGAAGATAGCCGAAGTCATGGCCGTCATGCCCAGCAT
AACATACAGTGCCGCCACCAGCCCCCTGAGCCCTGTTTCCCCCCACTACTCTTCCAAATTTGTGGAGACC
AGCCCCTCTGGACTTGACCCCAATGCCTCTGTTTACCAGCCCCTGAAGAAATGA

Translation (437 aa):
MKRRNADCSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFR
YQGLAFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRF
KDLKNFHVDLCRPFAAHWLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELLQN
KLHNAVQMKQKDKQNISQLEKKLKAEQEARSFVEKQLMEEKKRKKLEEATAARAVAFAAASRGECTETLR
NRIRELEAEGKKLTMDMKVKEDQIRELELKVQELRKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETR
IKLDLFSALGDAKRQLEIAQGQILQKDQEIKDLKQKIAEVMAVMPSITYSAATSPLSPVSPHYSSKFVET
SPSGLDPNASVYQPLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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