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Report for CCDS60155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60155.1 Public Homo sapiens 1 FGGY 24 110 108 CCDS HistoryNCBI Gene:55277Re-query CCDS DB by CCDS ID:60155.1Re-query CCDS DB by GeneID:55277See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371210.1 ENSP00000360254.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371210.1Link to Ensembl Protein Viewer:ENSP00000360254.1Re-query CCDS DB by Nucleotide ID:ENST00000371210Re-query CCDS DB by Protein ID:ENSP00000360254
Original member Current member NCBI NM_001278224.2 NP_001265153.1 Accepted alive Link to Nucleotide Sequence:NM_001278224.2Link to Protein Sequence:NP_001265153.1Re-query CCDS DB by Nucleotide ID:NM_001278224Re-query CCDS DB by Protein ID:NP_001265153Link to BLAST:NP_001265153.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265153.1 252 Q96C11-6 252 100% 0 0

Chromosomal Locations for CCDS 60155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 59554222 59554227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59607803 59607910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59625988 59626049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59638228 59638375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59660219 59660293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59667283 59667403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59674039 59674133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59757931 59757992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59762503 59762584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGGGGATCAGCAAAGACCCGATTTTTGTACCAGGCGTCTGGGGGCCTTATTTCTCAGCCATGGTACCTG
GGTTCTGGCTGAATGAAGGTGGTCAGAGCGTTACTGGAAAATTGATAGACCACATGGTACAAGGCCATGC
TGCTTTTCCAGAACTACAAGTAAAGGCCACAGCCAGATGCCAGAGTATATATGCATATTTGAACAGTCAC
CTGGATCTGATTAAGAAGGCTCAGCCTGTGGGTTTCCTTACTGTTGATTTACATGTTTGGCCAGATTTCC
ATGGCAACCGGTCTCCCTTAGCAGATCTGACACTAAAGGGCATGGTCACCGGATTGAAACTGTCTCAGGA
CCTTGATGATCTTGCCATTCTCTACCTGGCCACAGTTCAAGCCATTGCTTTGGGGACTCGCTTCATTATA
GAAGCCATGGAGGCAGCAGGGCACTCAATCAGTACTCTTTTCCTATGTGGAGGCCTCAGCAAGAATCCCC
TTTTTGTGCAAATGCATGCGGACATTACTGGCATGCCTGTGGTCCTGTCGCAAGAGGTGGAGTCCGTTCT
TGTGGGTGCTGCTGTTCTGGGTGCCTGTGCCTCAGGGGATTTCGCTTCTGTACAGGAAGCAATGGCAAAA
ATGAGCAAAGTTGGGAAAGTTGTGTTCCCGAGACTACAGGATAAAAAATACTATGATAAGAAATACCAAG
TATTCCTGAAGCTGGTTGAACACCAGAAGGAGTATTTGGCGATCATGAATGATGACTGA

Translation (252 aa):
MGISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQSIYAYLNSH
LDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDLAILYLATVQAIALGTRFII
EAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAK
MSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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