NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS60605.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60605.1 Public Homo sapiens 10 RRP12 24 110 108 CCDS HistoryNCBI Gene:23223Re-query CCDS DB by CCDS ID:60605.1Re-query CCDS DB by GeneID:23223See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60605.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315563.10 ENSP00000324315.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315563.10Link to Ensembl Protein Viewer:ENSP00000324315.6Re-query CCDS DB by Nucleotide ID:ENST00000315563Re-query CCDS DB by Protein ID:ENSP00000324315
Original member Current member NCBI NM_001284337.2 NP_001271266.1 Accepted alive Link to Nucleotide Sequence:NM_001284337.2Link to Protein Sequence:NP_001271266.1Re-query CCDS DB by Nucleotide ID:NM_001284337Re-query CCDS DB by Protein ID:NP_001271266Link to BLAST:NP_001271266.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271266.1 1197 Q5JTH9-2 1197 100% 0 0

Chromosomal Locations for CCDS 60605.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97357094 97357196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97358537 97358619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97358943 97359010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97360546 97360618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97363854 97363903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366108 97366233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366446 97366621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366742 97366909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97367041 97367132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97369425 97369582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370167 97370274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370455 97370560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370716 97370796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370923 97371081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97372073 97372166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97372736 97372803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373046 97373200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373575 97373737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373830 97373894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97379293 97379414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97379628 97379770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97380799 97380913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97381386 97381483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97381715 97381826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97385166 97385257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97385895 97385993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97388252 97388379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97388489 97388624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97396218 97396301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97400305 97400534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97401093 97401231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3594 nt):
ATGGGTCGCTCGGGAAAGTTGCCTTCTGGTGTCTCAGCTAAGTTGAAGCGCTGGAAGAAAGGCCACAGCA
GCGACAGCAACCCCGCCATCTGCCGCCACCGTCAGGCCGCCCGCAGCCGCTTCTTCAGCCGGCCGTCAGG
AAGGAGTGACCTGACAGTCGATGCTGTGAAGTTACATAATGAGCTGCAGTCAGGGTCCTTGCGCTTGGGC
AAAAGCGAAGCCCCGGAGACGCCCATGGAAGAAGAGGCGGAGCTGGTTCTCACCGAGAAGTCCTCGGGTA
CCTTCCTGAGTGGCCTTTCCGACTGCACAAACGTCACCTTCAGCAAAGTACAGCGCTTCTGGGAGTCCAA
CTCGGCTGCCCACAAGGAGATCTGTGCTGTTCTGGCTGCTGTCACTGAGGTGATTCGCTCCCAGGGAGGG
AAGGAGACGGAGACTGAGTACTTCGCTGCTCTGATCCGGAAGGCTGCCCAGCATGGAGTATGCTCAGTCC
TCAAGGGCAGTGAATTCATGTTTGAAAAGGCCCCTGCCCATCATCCTGCTGCCATTTCCACTGCCAAGTT
CTGCATCCAGGAGATTGAGAAGTCTGGAGGCTCCAAGGAGGCCACCACCACGCTGCACATGCTGACGCTG
CTGAAGGACCTGCTGCCCTGCTTCCCGGAAGGCCTGGTGAAGAGCTGCAGTGAGACTCTCCTCAGGGTCA
TGACCTTGAGCCATGTGCTGGTGACAGCCTGTGCCATGCAGGCCTTTCACAGCCTCTTCCACGCCAGGCC
TGGCCTGAGCACCCTGTCAGCAGAGCTCAACGCCCAGATCATCACGGCCCTGTACGACTATGTTCCCAGT
GAGAATGATTTACAACCCCTGCTAGCCTGGCTTAAGGTCATGGAGAAAGCCCACATCAACCTGGTGAGGT
TGCAGTGGGACCTGGGGCTAGGCCACCTCCCTCGCTTTTTTGGAACTGCGGTGACCTGCCTCCTTTCCCC
ACACTCGCAAGTGCTGACTGCTGCTACGCAGAGCCTCAAGGAGATCCTGAAGGAATGCGTGGCTCCCCAC
ATGGCTGACATTGGCTCCGTGACCTCCTCGGCCTCAGGCCCTGCCCAATCTGTTGCCAAGATGTTCAGGG
CAGTGGAGGAGGGCCTGACGTACAAATTCCATGCGGCCTGGAGCTCCGTGTTGCAGCTGCTGTGTGTCTT
CTTCGAGGCGTGTGGGAGACAGGCCCACCCTGTGATGAGGAAGTGCCTCCAGTCCCTGTGTGACCTGCGC
CTCTCCCCTCATTTCCCCCACACGGCGGCTCTTGACCAGGCAGTGGGGGCTGCGGTGACCAGTATGGGAC
CTGAGGTGGTGCTGCAGGCTGTGCCTTTGGAAATTGATGGCTCTGAGGAGACTCTGGATTTCCCACGGAG
CTGGCTGCTGCCTGTCATCCGAGACCATGTTCAGGAAACGCGACTTGGTTTTTTCACCACCTACTTCTTG
CCCCTGGCTAACACCCTGAAGAGCAAAGCCATGGACCTGGCTCAGGCAGGCAGCACAGTGGAATCTAAGA
TCTACGACACACTCCAGTGGCAGATGTGGACACTCCTGCCTGGGTTCTGCACAAGGCCTACAGATGTGGC
CATCTCCTTCAAAGGGCTGGCACGGACGCTGGGCATGGCCATCAGCGAGCGTCCAGACCTGAGGGTCACC
GTGTGCCAGGCCCTGCGCACCCTCATCACCAAGGGCTGCCAGGCAGAGGCTGACCGTGCTGAAGTGAGTC
GCTTTGCCAAGAACTTTCTGCCGATCCTCTTCAACCTGTATGGGCAGCCCGTGGCAGCCGGGGACACTCC
AGCCCCTCGCCGGGCTGTGCTGGAAACCATCAGAACTTACCTCACCATCACTGACACTCAGTTGGTGAAC
AGTCTCCTGGAAAAAGCCAGTGAGAAGGTGCTCGACCCTGCCAGCTCTGACTTTACCAGATTGTCTGTCC
TGGACCTGGTCGTGGCCTTGGCTCCGTGTGCTGACGAAGCTGCCATCAGTAAGCTATACTCCACCATCCG
GCCCTACCTAGAGAGCAAGGCCCACGGGGTGCAGAAGAAGGCCTACCGAGTGCTGGAGGAGGTGTGTGCC
AGTCCTCAGGGCCCCGGGGCCCTCTTCGTGCAGAGCCACCTGGAGGACCTGAAGAAGACACTGCTGGACT
CGCTGCGGAGCACCTCCTCACCCGCCAAGAGGCCCCGTTTGAAGTGCCTCCTACACATCGTGAGGAAGCT
CTCAGCTGAACACAAGGAGTTCATCACTGCCCTCATCCCAGAGGTGATCCTGTGCACCAAGGAGGTGTCG
GTGGGCGCACGGAAGAACGCTTTTGCACTGCTCGTGGAGATGGGCCATGCTTTCCTAAGGTTTGGCTCGA
ACCAGGAAGAGGCCCTGCAGTGCTACCTCGTCCTGATCTACCCTGGCCTGGTGGGCGCGGTGACCATGGT
CAGCTGCAGCATCCTGGCCCTGACCCACCTCCTTTTCGAGTTTAAAGGTCTGATGGGGACCAGTACAGTG
GAGCAGCTGCTGGAGAATGTGTGCCTGCTTCTGGCCTCCCGCACCCGTGACGTGGTCAAGTCTGCACTGG
GCTTCATCAAGGTGGCAGTGACTGTCATGGACGTGGCGCACCTGGCCAAACATGTGCAGCTGGTGATGGA
AGCCATTGGGAAGCTTTCAGATGACATGCGGCGGCACTTCCGCATGAAGCTTCGGAACCTGTTCACCAAG
TTCATCCGCAAGTTTGGATTTGAGCTGGTGAAAAGGCTGTTGCCCGAGGAGTACCACAGAGTCCTGGTCA
ACATCCGGAAAGCTGAGGCCCGGGCCAAGAGGCACCGAGCCCTGAGCCAGGCTGCCGTGGAGGAGGAAGA
AGAGGAGGAGGAGGAGGAGGAGCCCGCCCAGGGCAAAGGTGACAGCATTGAGGAGATTTTAGCTGACTCA
GAGGACGAGGAGGACAATGAGGAGGAGGAAAGAAGCCGAGGCAAGGAGCAGCGGAAGCTGGCACGACAGA
GGAGCCGGGCATGGCTGAAAGAGGGCGGTGGGGACGAGCCCCTCAACTTCCTGGATCCCAAGGTGGCCCA
ACGAGTCCTGGCCACGCAGCCAGGGCCAGGCCGGGGCAGGAAGAAGGACCACGGCTTCAAGGTGAGCGCC
GATGGCCGGCTGATCATAAGGGAGGAGGCAGACGGCAACAAGATGGAGGAAGAGGAAGGTGCCAAAGGCG
AAGATGAAGAGATGGCTGACCCAATGGAAGATGTGATCATCAGGAATAAAAAGCACCAGAAGCTCAAGCA
CCAGAAAGAGGCTGAGGAGGAGGAGCTGGAGATACCCCCTCAGTACCAAGCTGGAGGCTCTGGCATTCAT
CGCCCTGTGGCCAAGAAGGCTATGCCTGGGGCTGAATACAAGGCCAAGAAAGCAAAAGGTGATGTGAAGA
AGAAAGGCCGGCCGGATCCCTATGCCTACATCCCCCTCAACAGAAGCAAGCTCAACCGCAGGAAGAAGAT
GAAGCTGCAGGGACAGTTCAAAGGCCTGGTGAAGGCTGCCCGGCGAGGTTCCCAGGTGGGACACAAAAAC
CGCAGAAAGGATCGTCGACCCTGA

Translation (1197 aa):
MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHNELQSGSLRLG
KSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGG
KETETEYFAALIRKAAQHGVCSVLKGSEFMFEKAPAHHPAAISTAKFCIQEIEKSGGSKEATTTLHMLTL
LKDLLPCFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPS
ENDLQPLLAWLKVMEKAHINLVRLQWDLGLGHLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPH
MADIGSVTSSASGPAQSVAKMFRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLR
LSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFL
PLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISFKGLARTLGMAISERPDLRVT
VCQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYGQPVAAGDTPAPRRAVLETIRTYLTITDTQLVN
SLLEKASEKVLDPASSDFTRLSVLDLVVALAPCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCA
SPQGPGALFVQSHLEDLKKTLLDSLRSTSSPAKRPRLKCLLHIVRKLSAEHKEFITALIPEVILCTKEVS
VGARKNAFALLVEMGHAFLRFGSNQEEALQCYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTV
EQLLENVCLLLASRTRDVVKSALGFIKVAVTVMDVAHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTK
FIRKFGFELVKRLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEEEEEEEEPAQGKGDSIEEILADS
EDEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGRKKDHGFKVSA
DGRLIIREEADGNKMEEEEGAKGEDEEMADPMEDVIIRNKKHQKLKHQKEAEEEELEIPPQYQAGGSGIH
RPVAKKAMPGAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAARRGSQVGHKN
RRKDRRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH