NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6067.1 Public Homo sapiens 8 ZNF395 24 110 108 CCDS HistoryNCBI Gene:55893Re-query CCDS DB by CCDS ID:6067.1Re-query CCDS DB by GeneID:55893See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6067.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344423.10 ENSP00000340494.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000344423.10Link to Ensembl Protein Viewer:ENSP00000340494.5Re-query CCDS DB by Nucleotide ID:ENST00000344423Re-query CCDS DB by Protein ID:ENSP00000340494
Original member Current member EBI ENST00000523095.5 ENSP00000428452.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523095.5Link to Ensembl Protein Viewer:ENSP00000428452.1Re-query CCDS DB by Nucleotide ID:ENST00000523095Re-query CCDS DB by Protein ID:ENSP00000428452
Original member Current member EBI ENST00000523202.5 ENSP00000429640.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523202.5Link to Ensembl Protein Viewer:ENSP00000429640.1Re-query CCDS DB by Nucleotide ID:ENST00000523202Re-query CCDS DB by Protein ID:ENSP00000429640
Original member Current member NCBI NM_018660.3 NP_061130.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018660.3Link to Protein Sequence:NP_061130.1Re-query CCDS DB by Nucleotide ID:NM_018660Re-query CCDS DB by Protein ID:NP_061130Link to BLAST:NP_061130.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061130.1 513 Q9H8N7 513 100% 0 0

Chromosomal Locations for CCDS 6067.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 28348719 28348830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28349125 28349228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28350064 28350156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28351495 28351807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28352573 28352673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28353173 28353408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28356670 28356779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28359592 28359824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28360885 28361124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1542 nt):
ATGGCGAGTGTCCTGTCCCGACGCCTTGGAAAGCGGTCCCTCCTGGGAGCCCGGGTGTTGGGACCCAGTG
CCTCGGAGGGGCCCTCGGCTGCCCCACCCTCGGAGCCACTGCTAGAAGGGGCCGCTCCCCAGCCTTTCAC
CACCTCTGATGACACCCCCTGCCAGGAGCAGCCCAAGGAAGTCCTTAAGGCTCCCAGCACCTCGGGCCTT
CAGCAGGTGGCCTTTCAGCCTGGGCAGAAGGTTTATGTGTGGTACGGGGGTCAAGAGTGCACAGGACTGG
TGGAGCAGCACAGCTGGATGGAGGGTCAGGTGACCGTCTGGCTGCTGGAGCAGAAGCTGCAGGTCTGCTG
CAGGGTGGAGGAGGTGTGGCTGGCAGAGCTGCAGGGCCCCTGTCCCCAGGCACCACCCCTGGAGCCCGGA
GCCCAGGCCCTGGCCTACAGGCCCGTCTCCAGGAACATCGATGTCCCAAAGAGGAAGTCGGACGCAGTGG
AAATGGATGAGATGATGGCGGCCATGGTGCTGACGTCCCTGTCCTGCAGCCCTGTTGTACAGAGTCCTCC
CGGGACCGAGGCCAACTTCTCTGCTTCCCGTGCGGCCTGCGACCCATGGAAGGAGAGTGGTGACATCTCG
GACAGCGGCAGCAGCACTACCAGCGGTCACTGGAGTGGGAGCAGTGGTGTCTCCACCCCCTCGCCCCCCC
ACCCCCAGGCCAGCCCCAAGTATTTGGGGGATGCTTTTGGTTCTCCCCAAACTGATCATGGCTTTGAGAC
CGATCCTGACCCTTTCCTGCTGGACGAACCAGCTCCACGAAAAAGAAAGAACTCTGTGAAGGTGATGTAC
AAGTGCCTGTGGCCAAACTGTGGCAAAGTTCTGCGCTCCATTGTGGGCATCAAACGACACGTCAAAGCCC
TCCATCTGGGGGACACAGTGGACTCTGATCAGTTCAAGCGGGAGGAGGATTTCTACTACACAGAGGTGCA
GCTGAAGGAGGAATCTGCTGCTGCTGCTGCTGCTGCTGCCGCAGGCACCCCAGTCCCTGGGACTCCCACC
TCCGAGCCAGCTCCCACCCCCAGCATGACTGGCCTGCCTCTGTCTGCTCTTCCACCACCTCTGCACAAAG
CCCAGTCCTCCGGCCCAGAACATCCTGGCCCGGAGTCCTCCCTGCCCTCAGGGGCTCTCAGCAAGTCAGC
TCCTGGGTCCTTCTGGCACATTCAGGCAGATCATGCATACCAGGCTCTGCCATCCTTCCAGATCCCAGTC
TCACCACACATCTACACCAGTGTCAGCTGGGCTGCTGCCCCCTCCGCCGCCTGCTCTCTCTCTCCGGTCC
GGAGCCGGTCGCTAAGCTTCAGCGAGCCCCAGCAGCCAGCACCTGCGATGAAATCTCATCTGATCGTCAC
TTCTCCACCCCGGGCCCAGAGTGGTGCCAGGAAAGCCCGAGGGGAGGCTAAGAAGTGCCGCAAGGTGTAT
GGCATCGAGCACCGGGACCAGTGGTGCACGGCCTGCCGGTGGAAGAAGGCCTGCCAGCGCTTTCTGGACT
GA

Translation (513 aa):
MASVLSRRLGKRSLLGARVLGPSASEGPSAAPPSEPLLEGAAPQPFTTSDDTPCQEQPKEVLKAPSTSGL
QQVAFQPGQKVYVWYGGQECTGLVEQHSWMEGQVTVWLLEQKLQVCCRVEEVWLAELQGPCPQAPPLEPG
AQALAYRPVSRNIDVPKRKSDAVEMDEMMAAMVLTSLSCSPVVQSPPGTEANFSASRAACDPWKESGDIS
DSGSSTTSGHWSGSSGVSTPSPPHPQASPKYLGDAFGSPQTDHGFETDPDPFLLDEPAPRKRKNSVKVMY
KCLWPNCGKVLRSIVGIKRHVKALHLGDTVDSDQFKREEDFYYTEVQLKEESAAAAAAAAAGTPVPGTPT
SEPAPTPSMTGLPLSALPPPLHKAQSSGPEHPGPESSLPSGALSKSAPGSFWHIQADHAYQALPSFQIPV
SPHIYTSVSWAAAPSAACSLSPVRSRSLSFSEPQQPAPAMKSHLIVTSPPRAQSGARKARGEAKKCRKVY
GIEHRDQWCTACRWKKACQRFLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH