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Report for CCDS60784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60784.1 Public Homo sapiens 11 SLC43A3 24 110 108 CCDS HistoryNCBI Gene:29015Re-query CCDS DB by CCDS ID:60784.1Re-query CCDS DB by GeneID:29015See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60784.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533524.5 ENSP00000434515.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533524.5Link to Ensembl Protein Viewer:ENSP00000434515.1Re-query CCDS DB by Nucleotide ID:ENST00000533524Re-query CCDS DB by Protein ID:ENSP00000434515
Original member Current member NCBI NM_001278206.2 NP_001265135.1 Accepted alive Link to Nucleotide Sequence:NM_001278206.2Link to Protein Sequence:NP_001265135.1Re-query CCDS DB by Nucleotide ID:NM_001278206Re-query CCDS DB by Protein ID:NP_001265135Link to BLAST:NP_001265135.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265135.1 504 Q8NBI5-2 504 100% 0 0

Chromosomal Locations for CCDS 60784.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 57407792 57407896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57409175 57409298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57409935 57410121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57414615 57414731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57414933 57415106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57416573 57416670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57417748 57417887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57420972 57421064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57421297 57421373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57423982 57424028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57425541 57425709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57425989 57426172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGGCGGGCCAGGGCCTGCCCCTGCACGTGGCCACACTGCTGACTGGGCTGCTGGAATGCCTGGGCTTTG
CTGGCGTCCTCTTTGGCTGGCCTTCACTAGTGTTTGTCTTCAAGAATGAAGATTACTTTAAGGATCTGTG
TGGACCAGATGCTGGGCCGATTGGCAATGCCACAGGGCAGGCTGGAAGGCTGGGATGCATGGGAGACCTT
TTTTCTACTCCAGACTGCAAAGCCCAGGATGAGAGGTTCTCACTCATCTTCACCCTGGGGTCCTTCATGA
ACAACTTCATGACATTCCCCACTGGCTACATCTTTGACCGGTTCAAGACCACCGTGGCACGCCTCATAGC
CATATTTTTCTACACCACCGCCACACTCATCATAGCCTTCACCTCTGCAGGCTCAGCCGTGCTGCTCTTC
CTGGCCATGCCAATGCTCACCATTGGGGGAATCCTGTTTCTCATCACCAACCTGCAGATTGGGAACCTAT
TTGGCCAACACCGTTCGACCATCATCACTCTGTACAATGGAGCATTTGACTCTTCCTCGGCAGTCTTCCT
TATTATTAAGCTTCTTTATGAAAAAGGCATCAGCCTCAGGGCCTCCTTCATCTTCATCTCTGTCTGCAGT
ACCTGGCATGTAGCACGCACTTTCCTCCTGATGCCCCGGGGGCACATCCCATACCCACTGCCCCCCAACT
ACAGCTATGGCCTGTGCCCTGGGAATGGCACCACAAAGGAAGAGAAGGAAACAGCTGAGCATGAAAACAG
GGAGCTACAGTCAAAGGAGTTCCTTTCAGCGAAGGAAGAGACCCCAGGGGCAGGGCAGAAGCAGGAACTC
CGCTCCTTCTGGAGCTACGCTTTCTCTCGGCGCTTTGCCTGGCACCTGGTGTGGCTGTCTGTGATACAGT
TGTGGCACTACCTCTTCATTGGCACTCTCAACTCCTTGCTGACCAACATGGCCGGTGGGGACATGGCACG
AGTCAGCACCTACACAAATGCCTTTGCCTTCACTCAGTTCGGAGTGCTGTGTGCCCCCTGGAATGGCCTG
CTCATGGACCGGCTTAAACAGAAGTACCAGAAGGAAGCAAGAAAGACAGGTTCCTCCACTTTGGCGGTGG
CCCTCTGCTCGACGGTGCCTTCGCTGGCCCTGACATCCCTGCTGTGCCTGGGCTTCGCCCTCTGTGCCTC
AGTCCCCATCCTCCCTCTCCAGTACCTCACCTTCATCCTGCAAGTGATCAGCCGCTCCTTCCTCTATGGG
AGCAACGCGGCCTTCCTCACCCTTGCTTTCCCTTCAGAGCACTTTGGCAAGCTCTTTGGGCTGGTGATGG
CCTTGTCGGCTGTGGTGTCTCTGCTCCAGTTCCCCATCTTCACCCTCATCAAAGGCTCCCTTCAGAATGA
CCCATTTTACGTGAATGTGATGTTCATGCTTGCCATTCTTCTGACATTCTTCCACCCCTTTCTGGTATAT
CGGGAATGCCGTACTTGGAAAGAAAGTCCCTCTGCAATTGCATAG

Translation (504 aa):
MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQAGRLGCMGDL
FSTPDCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSAGSAVLLF
LAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLYEKGISLRASFIFISVCS
TWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAEHENRELQSKEFLSAKEETPGAGQKQEL
RSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTLNSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGL
LMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYG
SNAAFLTLAFPSEHFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVY
RECRTWKESPSAIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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