NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS60959.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60959.1 Public Homo sapiens 11 SDHD 24 110 108 CCDS HistoryNCBI Gene:6392Re-query CCDS DB by CCDS ID:60959.1Re-query CCDS DB by GeneID:6392See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60959.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528048.5 ENSP00000436217.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528048.5Link to Ensembl Protein Viewer:ENSP00000436217.1Re-query CCDS DB by Nucleotide ID:ENST00000528048Re-query CCDS DB by Protein ID:ENSP00000436217
Original member Current member NCBI NM_001276503.2 NP_001263432.1 Accepted alive Link to Nucleotide Sequence:NM_001276503.2Link to Protein Sequence:NP_001263432.1Re-query CCDS DB by Nucleotide ID:NM_001276503Re-query CCDS DB by Protein ID:NP_001263432Link to BLAST:NP_001263432.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263432.1 85 O14521-3 85 100% 0 0

Chromosomal Locations for CCDS 60959.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 112086908 112086959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112087857 112087973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112094805 112094893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (258 nt):
ATGGCGGTTCTCTGGAGGCTGAGTGCCGTTTGCGGTGCCCTAGGAGGCCGAGCTCTGTTGCTTCGAACTC
CAGTGGTCAGACCTGCTCATATCTCAGCATTTCTTCAGGACCGACCTATCCCAGAATGGTGTGGAGTGCA
GCACATACACTTGTCACCGAGCCACCATTGGGCCTTGGACAAGTTGTTACTGACTATGTTCATGGGGATG
CCTTGCAGAAAGCTGCCAAGGCAGGGCTTTTGGCACTTTCAGCTTTAA

Translation (85 aa):
MAVLWRLSAVCGALGGRALLLRTPVVRPAHISAFLQDRPIPEWCGVQHIHLSPSHHWALDKLLLTMFMGM
PCRKLPRQGFWHFQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH