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Report for CCDS61178.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61178.1 Public Homo sapiens 12 MON2 24 110 108 CCDS HistoryNCBI Gene:23041Re-query CCDS DB by CCDS ID:61178.1Re-query CCDS DB by GeneID:23041See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61178.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393629.6 ENSP00000377249.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393629.6Link to Ensembl Protein Viewer:ENSP00000377249.2Re-query CCDS DB by Nucleotide ID:ENST00000393629Re-query CCDS DB by Protein ID:ENSP00000377249
Original member Current member NCBI NM_001278470.2 NP_001265399.1 Accepted alive Link to Nucleotide Sequence:NM_001278470.2Link to Protein Sequence:NP_001265399.1Re-query CCDS DB by Nucleotide ID:NM_001278470Re-query CCDS DB by Protein ID:NP_001265399Link to BLAST:NP_001265399.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265399.1 1711 Q7Z3U7-5 1711 100% 0 0

Chromosomal Locations for CCDS 61178.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 62467208 62467318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62484170 62484233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62493915 62494042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62495016 62495147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62498919 62499048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62500783 62500880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62501573 62501698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62508286 62508480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62524515 62524639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62525084 62525220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62525949 62526102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62532438 62532670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62534845 62534926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62535525 62535709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62537151 62537263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62537602 62537706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62538096 62538176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62538252 62538325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62538415 62538505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62543097 62543198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62544898 62545008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62546897 62547072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62549668 62549830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62552881 62553174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62555994 62556192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62560491 62561113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62565237 62565380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62566322 62566450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62571392 62571582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62578445 62578505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62580297 62580420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62585294 62585501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62588074 62588156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 62592586 62592749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5136 nt):
ATGTCCGGCACCAGCAGCCCCGAGGCGGTGAAGAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGCCT
TGTCACTGGAGTGCAAGAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAATCAGGAATAATAAAAGTTAA
AACAATTGCTGCACGAAACACTGAAATTTTGGCAGCACTGAAAGAGAACAGCTCAGAGGTTGTACAGCCT
TTTTTAATGGGTTGTGGAACCAAGGAACCGAAGATCACTCAGCTATGTTTGGCTGCTATTCAGAGACTCA
TGTCACATGAAGTCGTGTCTGAGACTGCAGCTGGAAATATAATTAACATGCTTTGGCAGCTAATGGAGAA
TAGTCTTGAAGAACTTAAGCTACTTCAAACAGTTCTTGTTCTTTTAACAACCAATACAGTAGTTCATGAT
GAGGCACTTTCTAAGGCAATCGTTCTTTGTTTTCGACTACACTTCACAAAAGATAATATTACAAATAATA
CAGCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTTTTTGAGAGGATGGTTGCTGAAGATGAACGACA
CAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAATAGTAACAGAAGATCTGTCAGTACCCTCAAA
CCTTGTGCTAAAGATGCATATATGCTTTTCCAGGATCTTTGTCAGTTGGTTAATGCTGATGCTCCTTATT
GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGTCAGTCCTCAATGATTT
TCCGCAGGTCTTTTTACAACACCAAGAATTTAGTTTCCTCCTCAAAGAAAGGGTATGTCCTCTTGTGATA
AAGCTCTTTTCTCCAAATATAAAGTTCAGACAAGGTTCCAGCACCTCATCTTCTCCAGCACCAGTTGAAA
AACCATATTTTCCTATCTGCATGCGTTTGCTGAGAGTAGTATCTGTTCTGATTAAGCAGTTTTACAGTCT
TTTGGTAACTGAATGTGAGATATTTCTGTCACTTCTGGTGAAATTTCTGGATGCAGATAAACCACAGTGG
CTACGAGCTGTTGCGGTGGAATCAATACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTC
AGTCCTATGATATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
ACAGTCCTTGTTTCTTGTCCCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCTGGAAACAATAATTTA
GGTGGCTCAGTCTCAGCACCAGCTAACTCAGGAATGGTGGGGATTGGTGGAGGTGTTACTTTGCTACCAG
CATTTGAATATAGGGGAACCTGGATACCTATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGCCACCTA
CTTAGAAATGTTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGTTACGCCATGTCTGTGGCATTCCAT
TGTTTGCTAGACCTTGTTCGTGGAATCACAAGTATGATTGAAGGAGAGCTAGGAGAGCTTGAAACAGAAT
GTCAAACCACCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGTCAACATC
AGACCAAATGGATAAGGAAATTGTTAGTAGGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGT
CTTCTTGCTGCACTCTCACTCCTTCTTGATGCCAGCACAGATGAAGCTGCCACTGAGAATATTTTAAAAG
CTGAACTGACTATGGCTGCTCTTTGTGGAAGACTGGGCCTTGTAACTTCAAGAGATGCCTTTATAACTGC
AATATGCAAAGGTTCCCTGCCTCCCCATTATGCTCTTACTGTATTGAATACCACCACTGCAGCTACACTT
TCCAACAAATCATATTCCGTTCAGGGCCAAAGTGTTATGATGATAAGTCCATCAAGTGAATCTCACCAAC
AAGTTGTGGCAGTGGGTCAACCTTTAGCAGTCCAGCCTCAAGGGACAGTAATGCTGACTTCCAAAAATAT
CCAGTGTATGAGGACTTTACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGCAACTT
GTCTTGGCAACTCTTCAGCATCTTGTGTGGATTCTGGGATTAAAGCCTAGTAGTGGCGGTGCCTTGAAAC
CTGGGAGAGCTGTAGAAGGACCCAGTACAGTTCTAACAACAGCAGTGATGACAGATTTACCAGTGATTTC
CAATATACTTTCAAGATTGTTTGAAAGCTCACAGTATCTTGATGATGTATCACTGCATCATTTAATAAAT
GCACTTTGCTCCTTGTCTCTAGAAGCAATGGATATGGCCTATGGAAATAATAAGGAACCATCTCTTTTTG
CTGTTGCCAAATTGTTAGAAACTGGTTTAGTTAATATGCACCGAATAGAAATTCTGTGGAGACCTCTGAC
TGGCCATCTACTTGAGGTCTGCCAGCATCCAAACTCTCGAATGAGAGAATGGGGAGCAGAAGCTTTAACT
TCTCTTATTAAAGCAGGATTAACATTTAACCATGATCCTCCACTCTCACAAAACCAGAGGCTGCAGTTGC
TTTTATTGAACCCGTTAAAGGAGATGTCCAATATTAATCATCCAGATATTCGACTCAAGCAGTTAGAATG
CGTGTTGCAGATTCTGCAGAGTCAGGGAGACAGTCTTGGGCCTGGATGGCCATTAGTGCTTGGAGTCATG
GGAGCAATCAGAAATGATCAAGGAGAATCCTTGATACGAACTGCATTCCAGTGTCTTCAGTTGGTTGTGA
CAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGCAGGTAGCTTTGGCCT
CCATAACCAAGAACTCAATATTAGTTTAACTTCAATAGGTTTATTGTGGAATATTTCAGATTATTTTTTC
CAAAGAGGGGAAACTATTGAAAAAGAACTAAATAAGGAAGAGGCAGCACAGCAAAAGCAGGCAGAAGAGA
AAGGAGTTGTTTTAAATCGGCCATTCCACCCTGCACCGCCATTTGATTGCTTGTGGTTATGTCTTTATGC
AAAATTGGGTGAACTATGTGTGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCT
ACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGTACTCTTTC
ATCTACTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCTGGAGGTGGCAA
TATTCTCATTCATCATTCAAGGGACACCGCCGAGAAGCAATGGGCTGAGACGTGGGTATTAACATTGGCT
GGAGTAGCAAGGATCTTCAACACTAGAAGATATTTGCTGCAGCCTTTAGGAGATTTTTCAAGAGCTTGGG
ATGTTCTTCTTGACCATATACAGTCAGCAGCACTCAGCAAAAACAATGAAGTATCTCTGGCTGCTCTGAA
AAGCTTCCAGGAAATTTTACAGATTGTGTCCCCTGTCAGAGACTCAGATAAGCCTGAGACACCACCTGTA
GTTAATGTACCTGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAGCAGGCCATTTGTAAGAACAGATT
CCATTGGAGAAAAACTAGGAAGATATAGTAGCTCTGAGCCACCCATTGTTACTGATGAGCTTGAAGATTT
GAATCTATGGTGGGCTGCGTGGAATACCTGGTATAGAATTGGATCTGAAAGTACTAAGCCTCCTATTACT
TTTGATAAACTAACTTTTATTCCTAGCCAGCCTTTTCTTACAGCTTTAATTCAGATATTTCCAGCTCTCT
ACCAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATATTGCACAGTGCTAT
TTCAGTCCCAATAAGTTCAGATGCATCCCCTTTTATTCTTCCATCTTATACCGAAGCAGTTTTGACAAGT
TTACAGGAAGCTGTACTTACAGCTTTAGATGTTCTCCAAAAGGCCATTTGTGTAGGACCAGAAAACATGC
AGATAATGTATCCAGCTATATTTGACCAGTTGTTGGCATTTGTAGAATTTTCCTGTAAACCTCCACAGTA
TGGACAGCTGGAAACAAAGCACATTGCAAATGCAAAATATAATCAGGCGGAATGGGTAGCCTTGAATTAT
GTGCCGTTTGCTGAAAGGTCTTTAGAAGTAGTTGTGGATTTATACCAAAAAACAGCGTGTCACAAAGCAG
TGGTGAATGAGAAAGTGCTCCAGAATATTATTAAGACTCTTAGGGTTCCTCTCAGTTTGAAGTATTCCTG
CCCTTCTGAAAGCACATGGAAACTAGCAGTATCCTCTCTCCTCAGAGTTCTTTCTATTGGGCTACCTGTT
GCCCGGCAGCATGCTTCTTCTGGAAAATTTGACAGTATGTGGCCAGAACTAGCCAATACTTTTGAAGATT
TTCTCTTTACTAAAAGCATACCTCCAGATAATCTCTCTATTCAAGAGTTTCAAAGAAATGAAAATATTGA
TGTCGAGGTAGTTCAACTTATCAGCAATGAGATACTACCTTATGCCAATTTTATTCCTAAGGAATTTGTT
GGTCAAATAATGACAATGCTTAACAAGGGCTCAATACATTCTCAGTCATCTTCATTTACAGAAGCAGAGA
TTGATATTCGTTTGAGAGAGGAATTTTCTAAAATGTGTTTTGAAACATTACTCCAGTTTTCCTTCAGTAA
TAAAGTCACAACACCTCAAGAAGGCTACATCTCACGAATGGCACTCTCAGTGCTTTTAAAGAGGTCCCAA
GATGTACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAAGGCAACAAGTAA
CAGAAATTATATTTGTTTTAAAAGCAGTCAGTACTCTTATTGATTCACTTAAGAAAACTCAGCCTGAGAA
TGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGAATGCATCACCTGTTCT
TCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGCAT
CCAGAGTTCAAAATGGAGAATCTTGA

Translation (1711 aa):
MSGTSSPEAVKKLLENMQSDLRALSLECKKKFPPVKEAAESGIIKVKTIAARNTEILAALKENSSEVVQP
FLMGCGTKEPKITQLCLAAIQRLMSHEVVSETAAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHD
EALSKAIVLCFRLHFTKDNITNNTAAATVRQVVTVVFERMVAEDERHRDIIEQPVLVQGNSNRRSVSTLK
PCAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVI
KLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDADKPQW
LRAVAVESIHRFCVQPQLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPATSNQAGNNNL
GGSVSAPANSGMVGIGGGVTLLPAFEYRGTWIPILTITVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFH
CLLDLVRGITSMIEGELGELETECQTTTEEGSSPTQSTEQQDLQSTSDQMDKEIVSRAVWEEMVNACWCG
LLAALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNTTTAATL
SNKSYSVQGQSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQL
VLATLQHLVWILGLKPSSGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLIN
ALCSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEVCQHPNSRMREWGAEALT
SLIKAGLTFNHDPPLSQNQRLQLLLLNPLKEMSNINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVM
GAIRNDQGESLIRTAFQCLQLVVTDFLPTMPCTCLQIVVDVAGSFGLHNQELNISLTSIGLLWNISDYFF
QRGETIEKELNKEEAAQQKQAEEKGVVLNRPFHPAPPFDCLWLCLYAKLGELCVDPRPAVRKSAGQTLFS
TIGAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADKEKIESGGGNILIHHSRDTAEKQWAETWVLTLA
GVARIFNTRRYLLQPLGDFSRAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQIVSPVRDSDKPETPPV
VNVPVPVLIGPISGMSRPFVRTDSIGEKLGRYSSSEPPIVTDELEDLNLWWAAWNTWYRIGSESTKPPIT
FDKLTFIPSQPFLTALIQIFPALYQHIKTGFNMDDLQKLGVILHSAISVPISSDASPFILPSYTEAVLTS
LQEAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYGQLETKHIANAKYNQAEWVALNY
VPFAERSLEVVVDLYQKTACHKAVVNEKVLQNIIKTLRVPLSLKYSCPSESTWKLAVSSLLRVLSIGLPV
ARQHASSGKFDSMWPELANTFEDFLFTKSIPPDNLSIQEFQRNENIDVEVVQLISNEILPYANFIPKEFV
GQIMTMLNKGSIHSQSSSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALSVLLKRSQ
DVLHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENVDGNTWAQVIALYPTLVECITCS
SSEVCSALKEALVPFKDFMQPPASRVQNGES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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