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Report for CCDS61307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61307.1 Public Homo sapiens 13 N4BP2L2 24 110 108 CCDS HistoryNCBI Gene:10443Re-query CCDS DB by CCDS ID:61307.1Re-query CCDS DB by GeneID:10443See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357505.10 ENSP00000350104.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357505.10Link to Ensembl Protein Viewer:ENSP00000350104.6Re-query CCDS DB by Nucleotide ID:ENST00000357505Re-query CCDS DB by Protein ID:ENSP00000350104
Original member Current member EBI ENST00000504114.5 ENSP00000427477.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000504114.5Link to Ensembl Protein Viewer:ENSP00000427477.1Re-query CCDS DB by Nucleotide ID:ENST00000504114Re-query CCDS DB by Protein ID:ENSP00000427477
Original member Current member NCBI NM_001278432.2 NP_001265361.1 Accepted alive Link to Nucleotide Sequence:NM_001278432.2Link to Protein Sequence:NP_001265361.1Re-query CCDS DB by Nucleotide ID:NM_001278432Re-query CCDS DB by Protein ID:NP_001265361Link to BLAST:NP_001265361.1
Original member Current member NCBI NM_001387015.1 NP_001373944.1 Accepted alive Link to Nucleotide Sequence:NM_001387015.1Link to Protein Sequence:NP_001373944.1Re-query CCDS DB by Nucleotide ID:NM_001387015Re-query CCDS DB by Protein ID:NP_001373944Link to BLAST:NP_001373944.1
Original member Current member NCBI NM_001387018.1 NP_001373947.1 Accepted alive Link to Nucleotide Sequence:NM_001387018.1Link to Protein Sequence:NP_001373947.1Re-query CCDS DB by Nucleotide ID:NM_001387018Re-query CCDS DB by Protein ID:NP_001373947Link to BLAST:NP_001373947.1
Original member Current member NCBI NM_001387019.1 NP_001373948.1 Accepted alive Link to Nucleotide Sequence:NM_001387019.1Link to Protein Sequence:NP_001373948.1Re-query CCDS DB by Nucleotide ID:NM_001387019Re-query CCDS DB by Protein ID:NP_001373948Link to BLAST:NP_001373948.1

Chromosomal Locations for CCDS 61307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 32436382 32436405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32438652 32438737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32442388 32444126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32517857 32518003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32521373 32521449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32522182 32522270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32527458 32527509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2214 nt):
ATGGCATTGTGTTCAGCACTGATGACTATTTTCACCATCAAGATGGGTACAGCAAAACAAGCTATCGATC
AGGGAAGATCTCCAGTTATAATAGATAACACTAATATACAAGCTTGGGAAATGAAGCCATATGTGGAAGT
GGCCATAGGAAAAGGATACAGAGTAGAGTTTCATGAACCTGAAACTTGGTGGAAATTTGATCCTGAAGAA
TTAGAAAAGAGGAATAAACATGGTGTGTCTCGAAAGAAGATTGCTCAGATGTTGGATCGTTATGAATATC
AAATGTCCATTTCTATTGTAATGAATTCAGTGGAACCATCACACAAAAGCACACAAAGACCTCCTCCTCC
ACAGGGGAGACAGAGAGAAAGAGTTTTGAAGAAAACTGGGCATAGGCTCAGCAAAACCAAACAGAAGAGG
AACAGAAAAAGAAACAAAAAGCAGAACAGTCAGAATAGAATCATGGAGGAAAACTCATTAGAATTCTTAA
GTGATCTTACACCGGGAGATCAGGACCCATCTCAGAGTGAAGAGGAAGACATTGAAAAGACCAGAAGAGA
ATCAGAATATCCCTTCATTGATGGTCTACAAAATGAAGTCGGAGATTTTGTGACTGGATATAAAGAAAAA
AGATGGAAAAATAAAGATCCTAAAGACAGTTTCCAAAACGTTATGTCTATAGTTGAATTAGACAACACAC
CAAAGAATTACCTCTCTAAGGAAGGTGATAACTTGTTTGTAAGTTTGTTACTGAGGCCAAATGAAATCTC
CGTTACTTGTCCAATACTGACTCAAAACCTTTCCTGTGTAACAACTGATGACTGCTCTGGCATGAAGGTA
GAAAAGCATATTAGAAATAGGCATACCATAGCATTAGACACCCAGGACCTTTCTGCGGAAACTTCATGCT
TATTTATGAAGAAGAGAGAAATAGTAGATAAAAATCTCTCACATGAACCCATTCTGTGCCATCAACATGG
AATCAGAATGTCAGATAAAGTTTTAAGAGAGGAACAAGTGTATACAACTAAAATCAATCACTGGGCTTTT
TTCACAACCAATTTATCTGATGAAGATTTACAGCTGGGCTCTGACAGACAGCCCTATTTTGGTAGCTGGC
CTGCAGGACCTCATAAGTTTATATGTGAACAGAGACCAAAGAAAGATAGAGCATGTAAGTTGGCTGGTCC
TGACAGCAGGGGGCAATGGATTCAAATGATCTTCACTTCGGTGGCAGCATCAGAACCAGGAAACAATCCA
GAAATATTGACAGACAAACTACTGATAGGAAATGAAGATTTTTCACCTCCACCTGAAACTATGGATTCAT
TCATAGAAACAAACCTCTTCAGAAGCTGCTTACCTCAACCGGATATACCAAAGAATGCCTTAGAATCAAC
AAAAAATAAGAAAAGGAGGAAGAAAAGGATTTTCAATTTGGTACCAAATTTTGACTTATTAGGACAGAGT
CGTATCGGTGTAAAAGAAAGGGAGAAATGTGACCTGTTAACAAAAAACCATGGACTAAAAATTACTTTGG
GAGAAGAAAAAGATAGAATTTCAGAAAGGAACAGTGAAGAGGAGAATAAACAAAAACTTATGACCTTTGA
TCATCATCCATTGTGGTTTTACCTTGATATTATCAAAGCTACCCCTTTAAATATTGATGGACAGCGTTAT
TCTCATTGCCTGTCATTTAACAGACTAAGGTGCTCTGCATCTTTATACAAAAATTATATTCCTTCTTTTG
TGCTACATAATTTATCTAGTATTTGGAAGCCATCTTTTACAAACAAGAAACTGTTTTTGACTTTCGAATC
TCAGACAAGAGTAGGTAATAAACTAAATGATGCAGGGTTTATTTCTCCAGAAATTTTACATAGTCATCCT
GATACTTCGTGCTCTTTGGGAGTCACTTCTGATTTTCACTTTTTAAATGAAAGGTTTGATAGAAAGCTGA
AAAGATGGGAAGAACCTAAGGAATTACCAGCTGAGGACAGCCAAGACTTAACAAGCACTGACTACCGTTC
CCTTGAGCTACCATTATCACAAGGGTTTGCCTTTCAATTAGTAAAGCTTTTTGGATCTCCAGGCGTTCCA
ATGGAATCCTTGTTGCCTGATGACTATGTGGTTCCCCTTGACTGGAAGACACTAAAGATGATCTACTTGC
AATGGAAGATGTCAGTGGAGAAAAGACAGAAGAAGATTGGTTGA

Translation (737 aa):
MALCSALMTIFTIKMGTAKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEE
LEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQRERVLKKTGHRLSKTKQKR
NRKRNKKQNSQNRIMEENSLEFLSDLTPGDQDPSQSEEEDIEKTRRESEYPFIDGLQNEVGDFVTGYKEK
RWKNKDPKDSFQNVMSIVELDNTPKNYLSKEGDNLFVSLLLRPNEISVTCPILTQNLSCVTTDDCSGMKV
EKHIRNRHTIALDTQDLSAETSCLFMKKREIVDKNLSHEPILCHQHGIRMSDKVLREEQVYTTKINHWAF
FTTNLSDEDLQLGSDRQPYFGSWPAGPHKFICEQRPKKDRACKLAGPDSRGQWIQMIFTSVAASEPGNNP
EILTDKLLIGNEDFSPPPETMDSFIETNLFRSCLPQPDIPKNALESTKNKKRRKKRIFNLVPNFDLLGQS
RIGVKEREKCDLLTKNHGLKITLGEEKDRISERNSEEENKQKLMTFDHHPLWFYLDIIKATPLNIDGQRY
SHCLSFNRLRCSASLYKNYIPSFVLHNLSSIWKPSFTNKKLFLTFESQTRVGNKLNDAGFISPEILHSHP
DTSCSLGVTSDFHFLNERFDRKLKRWEEPKELPAEDSQDLTSTDYRSLELPLSQGFAFQLVKLFGSPGVP
MESLLPDDYVVPLDWKTLKMIYLQWKMSVEKRQKKIG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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