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Report for CCDS61612.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61612.1 Public Homo sapiens 15 EIF3J 24 110 108 CCDS HistoryNCBI Gene:8669Re-query CCDS DB by CCDS ID:61612.1Re-query CCDS DB by GeneID:8669See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61612.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535391.5 ENSP00000440221.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535391.5Link to Ensembl Protein Viewer:ENSP00000440221.1Re-query CCDS DB by Nucleotide ID:ENST00000535391Re-query CCDS DB by Protein ID:ENSP00000440221
Original member Current member NCBI NM_001284335.2 NP_001271264.1 Accepted alive Link to Nucleotide Sequence:NM_001284335.2Link to Protein Sequence:NP_001271264.1Re-query CCDS DB by Nucleotide ID:NM_001284335Re-query CCDS DB by Protein ID:NP_001271264Link to BLAST:NP_001271264.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271264.1 204 O75822-2 204 100% 0 0

Chromosomal Locations for CCDS 61612.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 44537195 44537237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 44537324 44537427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 44550876 44550930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 44551431 44551522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 44554553 44554667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 44560249 44560322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 44561018 44561149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGGCGGCGGCGGCGGCGGCGGCGGGGGACTCGGACTCCTGGGACGCCGACGCTTTCTCCGTGGAAGACC
CAGTGCGGAAGGTGGGGGGCGGCGGCACTGCCGGCGGGGACCGCTGGGAAGGCGAGGACGAGGACGAGGA
CGTCAAGGATAACTGGGATGACGATGATGATGAAAAAAAAGAGGAAGCAGAAGTAAAACCAGAGGTAAAA
ATTTCAGAAAAGAAAAAAATAGCAGAGAAGATAAAAGAGAAAGAACGGCAACAGAAGAAAAGGCAAGAAG
AAATTAAAAAGAGGTTAGAAGAACCCGAAGAACCTAAAGTGCTAACACCAGAAGAACAATTAGCAGATAA
ACTGCGGCTAAAGAAATTACAGGAAGAGTCAGACCTCGAATTAGCAAAGGAAACTTTTGTGGAAATTGAT
GACTTGAAAAAAATTACCAATTCACTGACTGTGCTTTGCAGTGAAAAACAGAAGCAAGAAAAGCAAAGCA
AAGCCAAAAAGAAGAAGAAAGGTGTGGTTCCTGGAGGGGGATTAAAAGCCACCATGAAAGATGATCTGGC
AGATTATGGTGGTTATGATGGAGGATATGTACAAGACTATGAAGACTTCATGTGA

Translation (204 aa):
MAAAAAAAGDSDSWDADAFSVEDPVRKVGGGGTAGGDRWEGEDEDEDVKDNWDDDDDEKKEEAEVKPEVK
ISEKKKIAEKIKEKERQQKKRQEEIKKRLEEPEEPKVLTPEEQLADKLRLKKLQEESDLELAKETFVEID
DLKKITNSLTVLCSEKQKQEKQSKAKKKKKGVVPGGGLKATMKDDLADYGGYDGGYVQDYEDFM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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