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Report for CCDS61679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61679.1 Public Homo sapiens 15 AAGAB 24 110 108 CCDS HistoryNCBI Gene:79719Re-query CCDS DB by CCDS ID:61679.1Re-query CCDS DB by GeneID:79719See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61679.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542650.5 ENSP00000440735.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542650.5Link to Ensembl Protein Viewer:ENSP00000440735.1Re-query CCDS DB by Nucleotide ID:ENST00000542650Re-query CCDS DB by Protein ID:ENSP00000440735
Original member Current member EBI ENST00000561452.5 ENSP00000453263.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561452.5Link to Ensembl Protein Viewer:ENSP00000453263.1Re-query CCDS DB by Nucleotide ID:ENST00000561452Re-query CCDS DB by Protein ID:ENSP00000453263
Original member Current member NCBI NM_001271885.2 NP_001258814.1 Accepted alive Link to Nucleotide Sequence:NM_001271885.2Link to Protein Sequence:NP_001258814.1Re-query CCDS DB by Nucleotide ID:NM_001271885Re-query CCDS DB by Protein ID:NP_001258814Link to BLAST:NP_001258814.1
Original member Current member NCBI NM_001271886.2 NP_001258815.1 Accepted alive Link to Nucleotide Sequence:NM_001271886.2Link to Protein Sequence:NP_001258815.1Re-query CCDS DB by Nucleotide ID:NM_001271886Re-query CCDS DB by Protein ID:NP_001258815Link to BLAST:NP_001258815.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258814.1 206 Q6PD74-2 206 100% 0 0
NP_001258815.1 206 Q6PD74-2 206 100% 0 0

Chromosomal Locations for CCDS 61679.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 67202821 67202898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67203548 67203597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67204044 67204148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67208562 67208658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67209462 67209544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67231814 67231897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67235979 67236068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67236408 67236441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGATCTTGGTCTGCGATAGAGTGTCTGAAGATGGTATAAACCGACAAAAAGCTCAAGAATGGTGCATCA
AACATGGCTTTGAATTGGTAGAACTTAGTCCAGAGGAGTTGCCTGAGGAGGATGATGACTTCCCAGAATC
TACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGAT
AGGAACCAAGGCTTTAGCCTTCTCAACTCATTGACTGGAACAAACCATAGCATTGGGTCAGCAGATCCCT
GTCACCCAGAGCAACCCCATTTGCCAGCAGCAGATAGTACTGAATCCCTCTCTGATCATCGGGGTGGTGC
ATCTAACACAACAGATGCCCAGGTTGATAGCATTGTGGATCCCATGTTAGATCTGGATATTCAAGAATTA
GCCAGTCTTACCACTGGAGGAGGAGATGTGGAGAATTTTGAAAGACTCTTTTCAAAGTTAAAGGAAATGA
AAGACAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAAGTGCATGCAGAAAAGGTGGCCAAAGCATTCTG
GATGGCAATCGGGGGAGACAGAGATGAAATTGAAGGCCTTTCATCTGATGAAGAGCACTGA

Translation (206 aa):
MILVCDRVSEDGINRQKAQEWCIKHGFELVELSPEELPEEDDDFPESTGVKRIVQALNANVWSNVVMKND
RNQGFSLLNSLTGTNHSIGSADPCHPEQPHLPAADSTESLSDHRGGASNTTDAQVDSIVDPMLDLDIQEL
ASLTTGGGDVENFERLFSKLKEMKDKAATLPHEQRKVHAEKVAKAFWMAIGGDRDEIEGLSSDEEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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