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Report for CCDS61681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61681.1 Public Homo sapiens 15 IQCH 24 110 108 CCDS HistoryNCBI Gene:64799Re-query CCDS DB by CCDS ID:61681.1Re-query CCDS DB by GeneID:64799See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 61681.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000546225.5 ENSP00000444118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546225.5Link to Ensembl Protein Viewer:ENSP00000444118.1Re-query CCDS DB by Nucleotide ID:ENST00000546225Re-query CCDS DB by Protein ID:ENSP00000444118
Original member Current member NCBI NM_001284347.2 NP_001271276.2 Accepted alive Link to Nucleotide Sequence:NM_001284347.2Link to Protein Sequence:NP_001271276.2Re-query CCDS DB by Nucleotide ID:NM_001284347Re-query CCDS DB by Protein ID:NP_001271276Link to BLAST:NP_001271276.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271276.2 684 Q86VS3-2 684 100% 0 0

Chromosomal Locations for CCDS 61681.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 67372114 67372662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67373367 67373433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67384936 67385019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67388831 67389006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67400114 67400305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67416931 67417051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67421291 67421577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67465127 67465297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67475696 67475818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67490003 67490064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67494258 67494366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67500633 67500746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2055 nt):
ATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTGGGATTATGACTTTTTAATTTATGATGGTG
TCATAGACAATACAGCCCCAGACTTCTTAGCATTCAAGGAACATTTTAGCTTAGCTTGGGGAGGTATTTT
TTCTCTCTTGGAACACGTCGAGAAGTTTCTCAGGAACTATGCTATACCAGAAGTCAAAATAAAAGGGAAT
AATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACGAATAAACTTACCAGATATGACCTTCTCTCAGTGT
TAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGGGCAAAGGTACAAGGGCCAAGATGGAAA
TTCGGAGGCCGCCATGAAGATCCAAGCCACATGGAAATGCTACAAAGCAAGAAAATTCTTCCTCTTTTAT
CGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGCTGTTATATTGCCATAAGACTCGACTAA
AGAAGATACTAAAGGAATCACGTCAGAGACACCTGGAGAATTTTCGCATTCGAGCCAAGCATCTGGCAGC
CAACTGGAATCGCATCAGGACCTCCAGGAGGACTATTATCCATATCCCATCATTAGGGTATTCCCAGCCT
GTGAGAGAACATATTGCCGATTTCAACACACAGCAGAACATGCAGCTGGGGAGGCTGTGTGACATCTTAG
ATGCCAATGTGAATGTCATCTACATCTGCTCCCATCATATGAATGACGAGTTAGTGCTGTATTACAAAAA
AATCCTAAGTCTACATGCAGCCGTCAAATCTGGGAACCTTGAGGACAGAAGTGACCTGCAGGACAGGTTC
AAAATTATCACACCTGAAGCTGTAAACATCTTCCCTATGATAGAGCAGCTGAGTCAGCTGATAACTGATC
ACCTGCAAATACAGCGTTGGCTCTTTAAAATGGACTCTGAGTTCCGAGGAAATGGGACTGCATTTTGTGA
TATTCCTTCCTACCTAAAGTGCTACAAATGGGTGCTAAAGGAGAGTAGCAGATATGGCCTTGAAGACTGG
AGAAAGAAATGGGCACAAGAGCCAGCTTTGGTGAAGATCTCTGAGGAGCTGGCGGGCATTTTAGCACAGC
ACGCACAGCCAGTCAATGAGAAACGGTTCCCGACGTGGAGGAAATTCCTCCAAACATTTCTCAGTCAAGG
GGGTGTGATCGAAGCATTCCCACCTGCAGACAATGTCACCAACCTCACAGTGGACATGCTGATAGAGCCC
AACGGGAAAATCAGCGTGCTGTCGACAGGGGACCAGCTTCATGCTGAAAGCCCCTTCATCTCCTCTGGTA
CCACCGTGCCTCAGACCTCAGTGGATCCCCAAGTTCTCACTTATTTGTGCCTCCAAATTGGAAAAGCCTG
CAGAATGAGAGATGTGGTTGGTTACTTTTCGATAGATCTGGTGACTTTTATAGATCCAAGCACCTTGGAA
CAACAGGTGTGGGCAACCGGCCTTAACCTCGCATATAGTGACCAGCTGGCCCTGACTCAACTCACCTTAT
ACCTGACAAACGGCCATCTGGATTGCAGTTTGAGCACCCTGGAAGTGCCCCGCTTTGTTCCAAAGGAAAG
GAAGAAAACCAAATGCATGAGTGCGCTGTCAATGCCGATGCTGGCAACCAGTCGCTATGCAGTGATGACC
ACCCAGCTAAGACACAGCAATCTCTCACTGGTTTTCCACTATGTTTTTCTCCAGATCTGTAGGGCCCATG
GCATTGGCTATGATGTTGAGGAAAGGCAAGGAACTGTTTTTATATTATATGAGCACCTGAAGAGACACAA
GTTGGGAATGTTAACAATCGGCGAGGATCTCCAGGGGGTCCTCATGACCTTTGCTCGCCATCTCTTCATC
ATCCATCAAGAAATATCAGCACCTAATATGCAAGGCGAGACCAATTTTAAGACCACCATTGCTGATATTG
AAACTATTCTAAGAGTAACAAAGGAAAACAAAATGAGATTTGAAGAGGAGCAACAGTCCAAAGATGATAA
AAACCTCTCTAAACCCAAGAAATGA

Translation (684 aa):
MKVKTPLRALKSLWDYDFLIYDGVIDNTAPDFLAFKEHFSLAWGGIFSLLEHVEKFLRNYAIPEVKIKGN
NLVALLPEFELTNKLTRYDLLSVLEDPAHVQMLINLPGQRYKGQDGNSEAAMKIQATWKCYKARKFFLFY
RQQKWASGVIAIAWLLYCHKTRLKKILKESRQRHLENFRIRAKHLAANWNRIRTSRRTIIHIPSLGYSQP
VREHIADFNTQQNMQLGRLCDILDANVNVIYICSHHMNDELVLYYKKILSLHAAVKSGNLEDRSDLQDRF
KIITPEAVNIFPMIEQLSQLITDHLQIQRWLFKMDSEFRGNGTAFCDIPSYLKCYKWVLKESSRYGLEDW
RKKWAQEPALVKISEELAGILAQHAQPVNEKRFPTWRKFLQTFLSQGGVIEAFPPADNVTNLTVDMLIEP
NGKISVLSTGDQLHAESPFISSGTTVPQTSVDPQVLTYLCLQIGKACRMRDVVGYFSIDLVTFIDPSTLE
QQVWATGLNLAYSDQLALTQLTLYLTNGHLDCSLSTLEVPRFVPKERKKTKCMSALSMPMLATSRYAVMT
TQLRHSNLSLVFHYVFLQICRAHGIGYDVEERQGTVFILYEHLKRHKLGMLTIGEDLQGVLMTFARHLFI
IHQEISAPNMQGETNFKTTIADIETILRVTKENKMRFEEEQQSKDDKNLSKPKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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