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Report for CCDS6287.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6287.1 Public Homo sapiens 8 ANKRD46 24 110 108 CCDS HistoryNCBI Gene:157567Re-query CCDS DB by CCDS ID:6287.1Re-query CCDS DB by GeneID:157567See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6287.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335659.7 ENSP00000335287.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335659.7Link to Ensembl Protein Viewer:ENSP00000335287.3Re-query CCDS DB by Nucleotide ID:ENST00000335659Re-query CCDS DB by Protein ID:ENSP00000335287
Original member Current member EBI ENST00000520311.5 ENSP00000428388.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520311.5Link to Ensembl Protein Viewer:ENSP00000428388.1Re-query CCDS DB by Nucleotide ID:ENST00000520311Re-query CCDS DB by Protein ID:ENSP00000428388
Original member Current member EBI ENST00000519597.5 ENSP00000430056.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519597.5Link to Ensembl Protein Viewer:ENSP00000430056.1Re-query CCDS DB by Nucleotide ID:ENST00000519597Re-query CCDS DB by Protein ID:ENSP00000430056
Original member Current member NCBI NM_001270377.2 NP_001257306.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001270377.2Link to Protein Sequence:NP_001257306.1Re-query CCDS DB by Nucleotide ID:NM_001270377Re-query CCDS DB by Protein ID:NP_001257306Link to BLAST:NP_001257306.1
Original member Current member NCBI NM_001270378.2 NP_001257307.1 Accepted alive Link to Nucleotide Sequence:NM_001270378.2Link to Protein Sequence:NP_001257307.1Re-query CCDS DB by Nucleotide ID:NM_001270378Re-query CCDS DB by Protein ID:NP_001257307Link to BLAST:NP_001257307.1
Original member Current member NCBI NM_198401.4 NP_940683.1 Accepted alive Link to Nucleotide Sequence:NM_198401.4Link to Protein Sequence:NP_940683.1Re-query CCDS DB by Nucleotide ID:NM_198401Re-query CCDS DB by Protein ID:NP_940683Link to BLAST:NP_940683.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257306.1 228 Q86W74-2 228 100% 0 0
NP_001257307.1 228 Q86W74-2 228 100% 0 0
NP_940683.1 228 Q86W74-2 228 100% 0 0

Chromosomal Locations for CCDS 6287.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 100522555 100522771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100527845 100528003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100529523 100529833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGTCGTATGTTTTTGTAAATGATTCTTCTCAGACTAACGTGCCCTTGCTGCAAGCCTGTATTGATGGGG
ACTTTAATTATTCCAAGCGGCTTTTGGAAAGTGGCTTTGACCCAAATATTCGTGACAGCAGGGGCAGAAC
AGGCCTTCACCTTGCAGCAGCTCGAGGGAATGTAGACATCTGCCAGTTACTGCATAAATTCGGTGCCGAT
CTTCTGGCCACAGATTATCAAGGAAACACAGCTCTTCACCTCTGTGGCCATGTGGATACTATCCAATTTT
TGGTTTCCAATGGACTCAAAATTGATATTTGCAATCATCAAGGTGCTACCCCTTTAGTTCTGGCAAAGCG
CAGAGGAGTAAATAAAGATGTCATCCGATTGCTGGAATCTTTGGAAGAACAGGAGGTGAAAGGATTTAAC
AGAGGAACCCACTCGAAACTGGAGACCATGCAAACAGCTGAGAGTGAAAGTGCCATGGAAAGCCATTCAC
TCCTCAATCCCAACCTGCAGCAAGGTGAAGGAGTCCTCTCCAGCTTCCGAACCACGTGGCAGGAGTTTGT
GGAGGATCTGGGCTTCTGGAGAGTATTGCTGTTGATCTTCGTCATTGCTTTGCTGTCTCTTGGCATTGCT
TATTATGTGAGTGGGGTGCTACCCTTCGTGGAAAACCAGCCTGAACTGGTGCATTAA

Translation (228 aa):
MSYVFVNDSSQTNVPLLQACIDGDFNYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKFGAD
LLATDYQGNTALHLCGHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLLESLEEQEVKGFN
RGTHSKLETMQTAESESAMESHSLLNPNLQQGEGVLSSFRTTWQEFVEDLGFWRVLLLIFVIALLSLGIA
YYVSGVLPFVENQPELVH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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