NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS63153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63153.1 Public Homo sapiens 2 COPS7B 24 110 108 CCDS HistoryNCBI Gene:64708Re-query CCDS DB by CCDS ID:63153.1Re-query CCDS DB by GeneID:64708See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373608.7 ENSP00000362710.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373608.7Link to Ensembl Protein Viewer:ENSP00000362710.3Re-query CCDS DB by Nucleotide ID:ENST00000373608Re-query CCDS DB by Protein ID:ENSP00000362710
Original member Current member NCBI NM_001282950.3 NP_001269879.1 Accepted alive Link to Nucleotide Sequence:NM_001282950.3Link to Protein Sequence:NP_001269879.1Re-query CCDS DB by Nucleotide ID:NM_001282950Re-query CCDS DB by Protein ID:NP_001269879Link to BLAST:NP_001269879.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269879.1 273 Q9H9Q2-3 273 100% 0 0

Chromosomal Locations for CCDS 63153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 231788571 231788732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231791733 231791808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231794263 231794351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231796106 231796308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231798859 231798964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231801155 231801207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231807487 231807619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGGCAGGGGAACAGAAACCCTCAAGTAATCTCCTGGAGCAGTTTATTTTACTAGCCAAAGGTACCAGTG
GCTCAGCCCTCACTGCTCTCATAAGCCAGGTCTTAGAGGCTCCCGGAGTGTATGTCTTTGGAGAACTTCT
GGAGCTGGCCAACGTGCAGGAGCTTGCGGAAGGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTT
GCCTATGGGACATACCCAGATTACATAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGA
ACAAGCTGAAGCATCTTACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCCCCTACTCCGTGTTGCT
GAAAGACCTGGAGATGCGGAATCTCCGGGAACTAGAAGACCTTATCATTGAGGCTGTCTACACTGACATC
ATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCCGAA
AGAAGGATATCAATAATATTGTCAAGACCCTGCATGAATGGTGTGATGGCTGTGAAGCAGTTCTACTGGG
CATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAGCAGGTAGAA
GCAGAGAGGGAAAAACGTGATGTCCCCCTCCTGAATCTTATAACAACAGCTTTCTTCTGGTTACCAACAT
CAAGAAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAG
TGTCCCCCTCACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGTGA

Translation (273 aa):
MAGEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLF
AYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDI
IQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVE
AEREKRDVPLLNLITTAFFWLPTSRRHSKPPHPPRLRRWSSSWLNGSVPLTLSRGSPPRRCPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH