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Report for CCDS6331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6331.1 Public Homo sapiens 8 DEPTOR 24 110 108 CCDS HistoryNCBI Gene:64798Re-query CCDS DB by CCDS ID:6331.1Re-query CCDS DB by GeneID:64798See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286234.6 ENSP00000286234.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286234.6Link to Ensembl Protein Viewer:ENSP00000286234.5Re-query CCDS DB by Nucleotide ID:ENST00000286234Re-query CCDS DB by Protein ID:ENSP00000286234
Original member Current member NCBI NM_022783.4 NP_073620.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022783.4Link to Protein Sequence:NP_073620.2Re-query CCDS DB by Nucleotide ID:NM_022783Re-query CCDS DB by Protein ID:NP_073620Link to BLAST:NP_073620.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073620.2 409 Q8TB45-1 409 100% 0 0

Chromosomal Locations for CCDS 6331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 119873847 119873968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119928400 119928578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119929815 119929938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119965232 119965410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120001525 120001710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120002977 120003111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120006805 120006875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120009029 120009133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120049576 120049704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1230 nt):
ATGGAGGAGGGCGGCAGCACTGGCAGTGCTGGCAGTGACAGCAGCACCAGCGGGAGTGGCGGGGCGCAGC
AAAGGGAGCTGGAGCGCATGGCTGAGGTCTTGGTCACCGGGGAACAGCTACGGCTCAGGCTGCACGAAGA
AAAGGTTATTAAAGATAGACGTCATCATCTCAAGACCTACCCAAACTGTTTTGTCGCAAAAGAACTGATT
GACTGGCTGATTGAACACAAAGAGGCTTCTGACAGAGAGACGGCAATTAAACTCATGCAGAAATTAGCAG
ACCGGGGCATTATTCACCATGTGTGTGATGAGCATAAGGAATTCAAGGATGTCAAACTCTTCTACCGCTT
TAGAAAGGATGACGGCACCTTCCCATTGGATAATGAAGTGAAGGCCTTTATGAGAGGACAGAGGCTATAT
GAAAAGCTGATGAGCCCTGAAAACACACTCCTGCAGCCCAGGGAGGAGGAAGGGGTCAAGTATGAGCGCA
CCTTCATGGCATCTGAATTCCTGGACTGGCTGGTTCAGGAAGGTGAGGCCACCACGAGGAAAGAGGCAGA
GCAGCTTTGCCACCGGCTTATGGAGCATGGCATCATCCAGCATGTGTCCAACAAGCACCCATTTGTGGAC
AGCAATCTTCTCTACCAGTTCAGAATGAACTTCCGGCGGAGGCGAAGACTGATGGAGCTGCTCAATGAAA
AGTCCCCCTCCTCCCAGGAAACTCATGACAGTCCCTTCTGCCTGAGGAAGCAGAGCCATGACAATCGGAA
ATCTACCAGCTTTATGTCAGTGAGCCCCAGCAAGGAGATCAAGATCGTGTCTGCAGTGAGGAGAAGCAGC
ATGAGCAGCTGTGGCAGCAGCGGCTACTTCAGCAGCAGCCCCACCCTCAGCAGCAGCCCCCCTGTGCTCT
GCAACCCCAAGTCCGTGCTGAAGAGACCTGTCACCTCTGAGGAACTCCTTACTCCCGGGGCTCCGTATGC
AAGGAAGACATTCACGATTGTTGGTGACGCGGTTGGCTGGGGTTTTGTGGTGCGAGGAAGTAAGCCATGC
CACATCCAGGCTGTAGACCCCAGTGGCCCTGCAGCCGCAGCAGGAATGAAGGTCTGTCAGTTTGTCGTCT
CTGTCAACGGGCTCAATGTCCTGCATGTAGACTACCGGACCGTGAGCAATCTGATTCTGACGGGCCCACG
GACGATTGTCATGGAAGTCATGGAGGAGTTAGAGTGCTGA

Translation (409 aa):
MEEGGSTGSAGSDSSTSGSGGAQQRELERMAEVLVTGEQLRLRLHEEKVIKDRRHHLKTYPNCFVAKELI
DWLIEHKEASDRETAIKLMQKLADRGIIHHVCDEHKEFKDVKLFYRFRKDDGTFPLDNEVKAFMRGQRLY
EKLMSPENTLLQPREEEGVKYERTFMASEFLDWLVQEGEATTRKEAEQLCHRLMEHGIIQHVSNKHPFVD
SNLLYQFRMNFRRRRRLMELLNEKSPSSQETHDSPFCLRKQSHDNRKSTSFMSVSPSKEIKIVSAVRRSS
MSSCGSSGYFSSSPTLSSSPPVLCNPKSVLKRPVTSEELLTPGAPYARKTFTIVGDAVGWGFVVRGSKPC
HIQAVDPSGPAAAAGMKVCQFVVSVNGLNVLHVDYRTVSNLILTGPRTIVMEVMEELEC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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