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Report for CCDS63451.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63451.1 Public Homo sapiens 22 OSBP2 24 110 108 CCDS HistoryNCBI Gene:23762Re-query CCDS DB by CCDS ID:63451.1Re-query CCDS DB by GeneID:23762See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 63451.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535268.5 ENSP00000438713.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535268.5Link to Ensembl Protein Viewer:ENSP00000438713.1Re-query CCDS DB by Nucleotide ID:ENST00000535268Re-query CCDS DB by Protein ID:ENSP00000438713
Original member Current member NCBI NM_001282742.2 NP_001269671.1 Accepted alive Link to Nucleotide Sequence:NM_001282742.2Link to Protein Sequence:NP_001269671.1Re-query CCDS DB by Nucleotide ID:NM_001282742Re-query CCDS DB by Protein ID:NP_001269671Link to BLAST:NP_001269671.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269671.1 460 Q969R2-5 460 100% 0 0

Chromosomal Locations for CCDS 63451.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 30888288 30888340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30889180 30889234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30889490 30889636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30890728 30890973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30893122 30893242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30893463 30893566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30893638 30893733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30893817 30894001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30905837 30906069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30906197 30906339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGGAAGACTCCACATCCTTCATCACCGTGATCACCGAGGCCAAGGAAGACAGAAAAGCTGAAGGTAGCA
CCGGGACAAGTTCCGTGGACTGGAGCTCAGCAGACAATGTACTAGATGGTGCCTCGCTCGTGCCCAAGGG
TTCATCCAAAGTCAAGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACAGCCTTAACCTCTGGAGCATC
ATGAAGAACTGCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA
TGCTCCAGCGGCTGACAGAGGACCTGGAGTACCACCACCTGCTGGACAAGGCAGTGCACTGCACCAGCTC
AGTGGAGCAGATGTGCCTGGTGGCCGCCTTCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCATCGCC
AAGCCCTTCAACCCCATGCTGGGGGAGACCTTCGAGCTGGACCGCCTCGACGACATGGGCCTGCGCTCCC
TCTGTGAGCAGGTGAGCCACCACCCCCCCTCAGCTGCGCACTACGTGTTCTCCAAGCATGGCTGGAGCCT
CTGGCAGGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATACATCTCCATCATGCCGCTAGGTGCCATC
CACTTAGAATTCCAGGCCAGTGGGAATCACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACAACATCA
TCGTGGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGAGATTGTGAACCATAAGACCAATGACCGGTG
CCAGCTGAAGTTCCTGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACAGGAGTGGTGAGT
GACAGCCAGGGCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAGGTCA
TGCATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA
GCTGCTGTGGAAGAAGTACCCGCTGCCGGAGAACGCGGAGAACATGTACTACTTCTCAGAGCTGGCCCTG
ACCCTCAACGAGCACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGCGGCCCGACCAGCGGCTGATGG
AGAAGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG
CCGGCGGCTGGAGGCCTGCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGAAGGAGGCGGATGCCTAC
ACGCCACTGTGGTTTGAGAAGAGGCTGGATCCGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCT
ACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGA

Translation (460 aa):
MEDSTSFITVITEAKEDRKAEGSTGTSSVDWSSADNVLDGASLVPKGSSKVKRRVRIPNKPNYSLNLWSI
MKNCIGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVHCTSSVEQMCLVAAFSVSSYSTTVHRIA
KPFNPMLGETFELDRLDDMGLRSLCEQVSHHPPSAAHYVFSKHGWSLWQEITISSKFRGKYISIMPLGAI
HLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTNDRCQLKFLPYSYFSKEAARKVTGVVS
DSQGKAHYVLSGSWDEQMECSKVMHSSPSSPSSDGKQKTVYQTLSAKLLWKKYPLPENAENMYYFSELAL
TLNEHEEGVAPTDSRLRPDQRLMEKGRWDEANTEKQRLEEKQRLSRRRRLEACGPGSSCSSEEEKEADAY
TPLWFEKRLDPLTGEMACVYKGGYWEAKEKQDWHMCPNIF


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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