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Report for CCDS63706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63706.1 Public Homo sapiens 3 SENP7 24 110 108 CCDS HistoryNCBI Gene:57337Re-query CCDS DB by CCDS ID:63706.1Re-query CCDS DB by GeneID:57337See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63706.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314261.11 ENSP00000313624.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000314261.11Link to Ensembl Protein Viewer:ENSP00000313624.7Re-query CCDS DB by Nucleotide ID:ENST00000314261Re-query CCDS DB by Protein ID:ENSP00000313624
Original member Current member NCBI NM_001282801.2 NP_001269730.1 Accepted alive Link to Nucleotide Sequence:NM_001282801.2Link to Protein Sequence:NP_001269730.1Re-query CCDS DB by Nucleotide ID:NM_001282801Re-query CCDS DB by Protein ID:NP_001269730Link to BLAST:NP_001269730.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269730.1 984 Q9BQF6-5 984 100% 0 0

Chromosomal Locations for CCDS 63706.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101325943 101326080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101327666 101327816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101328478 101328546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101328646 101328689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101330334 101330386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101331985 101332109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101332770 101332862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101337509 101337631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101340095 101340211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101341646 101341779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101343686 101343954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101347872 101348051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101351618 101351651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101361715 101361861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101364834 101364991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101366430 101366769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101367830 101368011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101372008 101372126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101398861 101399055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101458955 101459052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101493873 101493968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101501070 101501119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101513091 101513130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2955 nt):
ATGGACAAGAGAAAGCTCGGGCGACGGCCATCTTCATCCGAAATCATCACAGAAGGAAAAAGGAAAAAGT
CATCTTCTGATTTATCGGAGATAAGAAAGATGTTAAATGCAAAACCAGAGGATGTCCATGTTCAATCACC
ACTGTCCAAATTCAGAAGCTCAGAACGCTGGACTCTCCCTTTGCAGTGGGAAAGAAGCCTAAGGAATAAA
GTCATCTCTCTAGACCATAAAAATAAAAAACATATCCGAGGGTGTCCTGTTACTTCCAAGTCATCACCAG
AAAGGATACCCAGAGTTATATTGACGAATGTCCTGGGAACGGAGTTAGGAAGAAAATACATAAGGACCCC
ACCTGTAACTGAGGGAAGTTTGAGTGATACAGACAACTTGCAATCAGAGCAACTTTCTTCATCATCTGAT
GGCAGCCTAGAATCTTATCAAAATCTAAACCCTCACAAGAGCTGTTATTTATCTGAAAGGGGCTCACAAC
GAAGTAAGACAGTAGATGACAATTCTGCAAAGCAGACTGCGCACAATAAAGAAAAACGAAGAAAGGATGA
TGGCATTTCTCTTTTAATATCTGATACTCAGCCTGAAGACCTTAACAGTGGAAGTAGAGGTTGTGATCAT
CTCGAACAGGAAAGCAGAAACAAGGATGTTAAATATTCTGATTCAAAAGTGGAACTCACTCTGATTTCCA
GGAAGACAAAGAGAAGGCTTAGAAATAATTTACCTGATTCTCAATATTGTACTTCTTTGGATAAGTCAAC
AGAACAGACAAAAAAACAAGAAGATGACTCAACAATATCCACTGAGTTTGAAAAGCCAAGTGAAAACTAT
CATCAGGATCCAAAACTGCCTGAAGAAATTACAACTAAACCTACAAAAAGTGATTTTACTAAACTATCCT
CACTTAACAGTCAGGAGTTGACTTTGAGTAATGCCACCAAAAGTGCCTCTGCCGGTTCAACCACTGAAAC
CGTTGAGAACTCTAATTCCATTGATATTGTGGGGATTTCTTCCCTGGTTGAGAAGGATGAGAATGAGTTG
AATACCATAGAAAAGCCTATTCTAAGAGGACATAATGAAGGGAACCAATCACTGATCTCAGCTGAACCAA
TTGTTGTTTCCAGTGATGAAGAAGGACCTGTTGAACATAAAAGTTCAGAAATTCTTAAGTTACAATCTAA
GCAAGACCGTGAGACAACTAATGAAAATGAGAGTACTTCTGAATCAGCATTGTTAGAACTACCATTGATT
ACATGTGAATCTGTACAGATGTCATCTGAATTATGCCCATATAATCCTGTCATGGAGAACATTTCCAGTA
TTATGCCTAGTAATGAGATGGATCTACAACTGGATTTTATATTTACTTCTGTTTATATTGGTAAAATAAA
AGGAGCTTCTAAAGGTTGTGTTACAATCACAAAAAAATATATTAAGATCCCATTTCAAGTGTCCCTGAAT
GAGATTTCATTGCTAGTGGATACCACACATTTAAAGCGGTTTGGGTTATGGAAAAGTAAGGATGATAATC
ACAGTAAAAGGAGTCATGCTATTCTTTTCTTCTGGGTCTCTTCAGATTATCTTCAAGAGATTCAGACCCA
ATTAGAACACTCTGTATTAAGCCAGCAATCAAAATCTAGTGAATTCATTTTCCTTGAACTACACAATCCT
GTTTCACAAAGAGAAGAATTGAAGCTGAAAGATATTATGACGGAAATAAGTATAATCAGTGGAGAATTAG
AGCTTTCTTACCCGTTGTCTTGGGTTCAGGCATTTCCTTTGTTTCAGAACCTCTCTTCAAAAGAAAGTTC
TTTTATTCATTATTACTGTGTTTCAACTTGTTCTTTCCCTGCTGGTGTTGCTGTTGCTGAAGAAATGAAG
CTGAAATCAGTATCTCAGCCCTCAAACACAGATGCGGCCAAGCCTACTTACACCTTCCTGCAGAAGCAAA
GTAGCGGTTGCTACTCCCTTTCTATTACATCTAATCCAGATGAAGAATGGCGAGAAGTCAGGCACACTGG
ACTTGTTCAGAAGTTGATTGTATATCCTCCACCACCTACTAAGGGGGGATTAGGAGTAACTAATGAAGAT
CTGGAGTGTTTAGAAGAAGGAGAGTTTCTTAATGATGTAATCATTGATTTTTACCTTAAGTATCTTATAT
TGGAGAAGGCATCAGATGAACTTGTTGAACGAAGTCACATTTTTAGTAGCTTTTTCTATAAATGCTTGAC
AAGAAAGGAAAATAATTTAACAGAAGATAATCCAAATCTTTCAATGGCACAGAGAAGACATAAAAGAGTA
AGAACATGGACTCGTCACATAAACATTTTTAATAAAGATTACATCTTTGTACCTGTAAATGAGTCGTCTC
ACTGGTATCTCGCAGTCATTTGTTTTCCATGGTTAGAAGAAGCTGTGTATGAAGATTTTCCACAAACTGT
ATCCCAGCAGTCCCAGGCTCAGCAGTCCCAAAATGACAACAAAACAATAGATAATGATCTACGTACTACT
TCGACACTGTCTTTGAGTGCAGAGGATTCCCAAAGTACCGAGTCGAATATGTCAGTACCAAAGAAAATGT
GTAAAAGGCCATGTATTCTTATACTAGACTCCTTGAAAGCTGCTTCTGTACAAAACACAGTTCAGAATTT
ACGAGAGTATTTAGAGGTAGAGTGGGAAGTTAAACTAAAAACTCATCGTCAATTCAGCAAAACAAACATG
GTGGATCTATGCCCTAAAGTTCCTAAACAGGACAATAGCAGTGATTGTGGAGTATATTTATTGCAGTATG
TGGAAAGCTTCTTCAAGGATCCTATTGTTAACTTTGAACTTCCAATTCATTTGGAGAAGTGGTTTCCTCG
TCATGTAATAAAGACCAAACGGGAAGATATTCGAGAGCTCATCTTGAAACTTCATTTACAGCAACAGAAG
GGCAGCAGTAGCTAG

Translation (984 aa):
MDKRKLGRRPSSSEIITEGKRKKSSSDLSEIRKMLNAKPEDVHVQSPLSKFRSSERWTLPLQWERSLRNK
VISLDHKNKKHIRGCPVTSKSSPERIPRVILTNVLGTELGRKYIRTPPVTEGSLSDTDNLQSEQLSSSSD
GSLESYQNLNPHKSCYLSERGSQRSKTVDDNSAKQTAHNKEKRRKDDGISLLISDTQPEDLNSGSRGCDH
LEQESRNKDVKYSDSKVELTLISRKTKRRLRNNLPDSQYCTSLDKSTEQTKKQEDDSTISTEFEKPSENY
HQDPKLPEEITTKPTKSDFTKLSSLNSQELTLSNATKSASAGSTTETVENSNSIDIVGISSLVEKDENEL
NTIEKPILRGHNEGNQSLISAEPIVVSSDEEGPVEHKSSEILKLQSKQDRETTNENESTSESALLELPLI
TCESVQMSSELCPYNPVMENISSIMPSNEMDLQLDFIFTSVYIGKIKGASKGCVTITKKYIKIPFQVSLN
EISLLVDTTHLKRFGLWKSKDDNHSKRSHAILFFWVSSDYLQEIQTQLEHSVLSQQSKSSEFIFLELHNP
VSQREELKLKDIMTEISIISGELELSYPLSWVQAFPLFQNLSSKESSFIHYYCVSTCSFPAGVAVAEEMK
LKSVSQPSNTDAAKPTYTFLQKQSSGCYSLSITSNPDEEWREVRHTGLVQKLIVYPPPPTKGGLGVTNED
LECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRV
RTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTT
STLSLSAEDSQSTESNMSVPKKMCKRPCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNM
VDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQK
GSSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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