NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS63822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63822.1 Public Homo sapiens 3 RSRC1 24 110 108 CCDS HistoryNCBI Gene:51319Re-query CCDS DB by CCDS ID:63822.1Re-query CCDS DB by GeneID:51319See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63822.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312179.10 ENSP00000308671.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312179.10Link to Ensembl Protein Viewer:ENSP00000308671.6Re-query CCDS DB by Nucleotide ID:ENST00000312179Re-query CCDS DB by Protein ID:ENSP00000308671
Original member Current member EBI ENST00000464171.5 ENSP00000419794.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000464171.5Link to Ensembl Protein Viewer:ENSP00000419794.1Re-query CCDS DB by Nucleotide ID:ENST00000464171Re-query CCDS DB by Protein ID:ENSP00000419794
Original member Current member NCBI NM_001271834.2 NP_001258763.1 Accepted alive Link to Nucleotide Sequence:NM_001271834.2Link to Protein Sequence:NP_001258763.1Re-query CCDS DB by Nucleotide ID:NM_001271834Re-query CCDS DB by Protein ID:NP_001258763Link to BLAST:NP_001258763.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258763.1 276 Q96IZ7-2 276 100% 0 0

Chromosomal Locations for CCDS 63822.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 158122105 158122298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 158123866 158123991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 158298039 158298075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 158354857 158354908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 158460935 158461003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 158537092 158537198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 158543335 158543487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 158544183 158544275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGGGACGTCGGTCATCAGATACTGAAGAAGAAAGCAGAAGCAAGAGAAAAAAGAAACACCGTAGACGGT
CCTCCTCGAGCAGTTCTTCAGATAGTAGAACATACAGCCGAAAGAAAGGAGGAAGGAAATCAAGATCAAA
GTCAAGATCTTGGTCCAGAGATCTTCAGCCTCGTTCACATTCTTATGATAGAAGACGCAGGCATCGATCA
AGCAGTAGCTCTTCTTATGGCTCCAGAAGGAAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAATCCT
ATAGAGTTCAGAGGTCTAGGTCAAAAAGCAGAACAAGAAGGGAATCTGGAAACATCAAAGCTGGATTAGA
ACATCTGCCACCAGCTGAACAGGCCAAAGCCAGACTACAGCTGGTTCTTGAAGCTGCTGCAAAAGCTGAT
GAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCAAGCCACCC
TGGTAGAACAAGTAAAAAGAGTAAAAGAAATTGAAGCTATTGAAAGTGATTCTTTTGTTCAGCAGACATT
CAGATCAAGTAAAGAAGTCAAAAAGTCAGTGGAACCTAGTGAAGTGAAACAAGCAACTTCAACATCAGGA
CCAGCATCAGCAGTTGCTGATCCACCCAGTACTGAAAAAGAAATAGATCCTACCAGCATCCCTACTGCTA
TCAAGTACCAAGATGACAATTCCCTGGCCCATCCAAATTTATTTATCGAGAAAGCTGATGCTGAGGAAAA
ATGGTTCAAGAGATTAATTGCTCTCCGACAAGAAAGACTAATGGGCAGTCCTGTGGCCTAA

Translation (276 aa):
MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRS
SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRESGNIKAGLEHLPPAEQAKARLQLVLEAAAKAD
EALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSG
PASAVADPPSTEKEIDPTSIPTAIKYQDDNSLAHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH