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Report for CCDS6418.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6418.2 Public Homo sapiens 8 BOP1 24 110 108 CCDS HistoryNCBI Gene:23246Re-query CCDS DB by CCDS ID:6418.2Re-query CCDS DB by GeneID:23246See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6418.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000569669.6 ENSP00000455106.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000569669.6Link to Ensembl Protein Viewer:ENSP00000455106.1Re-query CCDS DB by Nucleotide ID:ENST00000569669Re-query CCDS DB by Protein ID:ENSP00000455106
Original member Current member NCBI NM_015201.5 NP_056016.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015201.5Link to Protein Sequence:NP_056016.1Re-query CCDS DB by Nucleotide ID:NM_015201Re-query CCDS DB by Protein ID:NP_056016Link to BLAST:NP_056016.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056016.1 746 Q14137-1 746 100% 0 0

Chromosomal Locations for CCDS 6418.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144262164 144262317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144262396 144262503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144262588 144262672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144262853 144263141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144263221 144263401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144263478 144263610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144263692 144263761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144263831 144263911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144263981 144264142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144264225 144264437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144264515 144264616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144264714 144264831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144264917 144265071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144276224 144276304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144289095 144289304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144291272 144291370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2241 nt):
ATGGCGGGTTCGCGGGGTGCGGGGCGCACGGCGGCGCCGAGCGTGCGGCCGGAGAAGCGGCGGTCTGAGC
CCGAACTGGAGCCTGAGCCCGAGCCGGAGCCCCCCCTCCTCTGCACCTCTCCTCTCAGCCACAGCACCGG
CAGCGATTCTGGCGTCTCCGACAGCGAGGAAAGTGTGTTCTCAGGCCTGGAAGATTCCGGCAGTGACAGC
AGTGAGGATGATGACGAAGGCGACGAGGAGGGAGAGGACGGAGCCCTTGATGACGAGGGCCACAGTGGGA
TTAAAAAGACCACTGAGGAGCAGGTGCAGGCCAGCACTCCTTGCCCGAGGACAGAGATGGCGAGCGCCCG
GATTGGGGATGAGTATGCGGAGGACAGCTCTGATGAGGAGGACATCCGGAACACGGTGGGCAACGTGCCC
TTGGAGTGGTACGATGACTTCCCCCACGTGGGCTACGACCTGGATGGCAGGCGCATCTACAAGCCCCTGC
GGACCCGGGATGAGCTGGACCAGTTCCTGGACAAGATGGACGATCCTGACTACTGGCGCACCGTGCAGGA
CCCGATGACAGGGCGGGACCTGAGACTGACGGATGAGCAGGTGGCCCTGGTGCGGCGGCTGCAGAGTGGC
CAGTTTGGGGATGTGGGCTTCAACCCCTATGAGCCGGCTGTCGACTTCTTCAGCGGGGACGTCATGATCC
ACCCGGTGACCAACCGCCCGGCCGACAAGCGCAGCTTCATCCCCTCCCTGGTGGAGAAGGAGAAGGTCTC
TCGCATGGTGCACGCCATCAAGATGGGCTGGATCCAGCCTCGCCGGCCCCGAGACCCCACCCCCAGCTTC
TATGACCTGTGGGCCCAGGAGGACCCCAACGCCGTGCTCGGGCGCCACAAGATGCACGTACCTGCTCCCA
AGCTGGCCCTGCCAGGCCACGCCGAGTCGTACAACCCACCCCCTGAATACCTGCTCAGCGAGGAGGAGCG
CTTGGCGTGGGAACAGCAGGAGCCAGGCGAGAGGAAGCTGAGCTTTTTGCCACGCAAGTTCCCGAGCCTG
CGGGCCGTGCCTGCCTACGGACGCTTCATCCAGGAACGCTTCGAGCGCTGCCTTGACCTGTACCTGTGCC
CACGGCAGCGCAAGATGAGGGTGAATGTAGACCCTGAGGACCTCATCCCCAAGCTGCCTCGGCCGAGGGA
CCTGCAGCCCTTCCCCACGTGCCAGGCCCTGGTCTACAGGGGCCACAGTGACCTTGTCCGGTGCCTCAGT
GTCTCTCCTGGGGGCCAGTGGCTGGTTTCAGGCTCTGACGACGGCTCCCTGCGGCTCTGGGAGGTGGCCA
CTGCCCGCTGTGTGAGGACTGTTCCCGTGGGGGGCGTGGTGAAGAGTGTGGCCTGGAACCCCAGCCCCGC
TGTCTGCCTGGTGGCTGCAGCCGTGGAGGACTCGGTGCTGCTGCTGAACCCAGCTCTGGGGGACCGGCTG
GTGGCGGGCAGCACAGATCAGCTGTTGAGCGCCTTCGTCCCGCCTGAGGAGCCCCCCTTGCAGCCGGCCC
GCTGGCTGGAGGCCTCAGAGGAGGAGCGCCAAGTGGGCCTGCGGCTGCGCATCTGCCACGGGAAGCCAGT
GACGCAGGTGACCTGGCACGGGCGTGGGGACTACCTGGCCGTGGTGCTGGCCACCCAAGGCCACACCCAG
GTGCTGATTCACCAGCTGAGCCGTCGCCGCAGCCAGAGTCCGTTCCGCCGCAGCCACGGACAGGTGCAGC
GAGTGGCCTTCCACCCTGCCCGGCCCTTCCTGTTGGTGGCGTCCCAGCGCAGCGTCCGCCTCTACCACCT
GCTGCGCCAGGAGCTCACCAAGAAGCTGATGCCCAACTGCAAGTGGGTGTCCAGCCTGGCGGTGCACCCT
GCAGGTGACAACGTCATCTGTGGGAGCTACGATAGCAAGCTGGTGTGGTTTGACCTGGATCTTTCCACCA
AGCCATACAGGATGCTGAGACACCACAAGAAGGCTCTGCGGGCTGTGGCCTTCCACCCGCGGTACCCACT
CTTTGCGTCAGGCTCGGACGACGGCAGTGTCATCGTCTGCCATGGCATGGTGTACAATGACCTTCTGCAG
AACCCCTTGCTGGTGCCCGTCAAGGTGCTGAAGGGACACGTGCTGACCCGAGATCTGGGAGTGCTGGACG
TCATCTTCCACCCCACCCAGCCGTGGGTCTTCTCCTCGGGGGCAGACGGGACTGTCCGCCTCTTCACCTA
G

Translation (746 aa):
MAGSRGAGRTAAPSVRPEKRRSEPELEPEPEPEPPLLCTSPLSHSTGSDSGVSDSEESVFSGLEDSGSDS
SEDDDEGDEEGEDGALDDEGHSGIKKTTEEQVQASTPCPRTEMASARIGDEYAEDSSDEEDIRNTVGNVP
LEWYDDFPHVGYDLDGRRIYKPLRTRDELDQFLDKMDDPDYWRTVQDPMTGRDLRLTDEQVALVRRLQSG
QFGDVGFNPYEPAVDFFSGDVMIHPVTNRPADKRSFIPSLVEKEKVSRMVHAIKMGWIQPRRPRDPTPSF
YDLWAQEDPNAVLGRHKMHVPAPKLALPGHAESYNPPPEYLLSEEERLAWEQQEPGERKLSFLPRKFPSL
RAVPAYGRFIQERFERCLDLYLCPRQRKMRVNVDPEDLIPKLPRPRDLQPFPTCQALVYRGHSDLVRCLS
VSPGGQWLVSGSDDGSLRLWEVATARCVRTVPVGGVVKSVAWNPSPAVCLVAAAVEDSVLLLNPALGDRL
VAGSTDQLLSAFVPPEEPPLQPARWLEASEEERQVGLRLRICHGKPVTQVTWHGRGDYLAVVLATQGHTQ
VLIHQLSRRRSQSPFRRSHGQVQRVAFHPARPFLLVASQRSVRLYHLLRQELTKKLMPNCKWVSSLAVHP
AGDNVICGSYDSKLVWFDLDLSTKPYRMLRHHKKALRAVAFHPRYPLFASGSDDGSVIVCHGMVYNDLLQ
NPLLVPVKVLKGHVLTRDLGVLDVIFHPTQPWVFSSGADGTVRLFT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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