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Report for CCDS6432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6432.1 Public Homo sapiens 8 LRRC14 24 110 108 CCDS HistoryNCBI Gene:9684Re-query CCDS DB by CCDS ID:6432.1Re-query CCDS DB by GeneID:9684See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6432.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292524.6 ENSP00000292524.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292524.6Link to Ensembl Protein Viewer:ENSP00000292524.1Re-query CCDS DB by Nucleotide ID:ENST00000292524Re-query CCDS DB by Protein ID:ENSP00000292524
Original member Current member EBI ENST00000529022.5 ENSP00000434768.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529022.5Link to Ensembl Protein Viewer:ENSP00000434768.1Re-query CCDS DB by Nucleotide ID:ENST00000529022Re-query CCDS DB by Protein ID:ENSP00000434768
Original member Current member NCBI NM_001272036.2 NP_001258965.1 Accepted alive Link to Nucleotide Sequence:NM_001272036.2Link to Protein Sequence:NP_001258965.1Re-query CCDS DB by Nucleotide ID:NM_001272036Re-query CCDS DB by Protein ID:NP_001258965Link to BLAST:NP_001258965.1
Original member Current member NCBI NM_014665.4 NP_055480.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014665.4Link to Protein Sequence:NP_055480.1Re-query CCDS DB by Nucleotide ID:NM_014665Re-query CCDS DB by Protein ID:NP_055480Link to BLAST:NP_055480.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258965.1 493 Q15048 493 100% 0 0
NP_055480.1 493 Q15048 493 100% 0 0

Chromosomal Locations for CCDS 6432.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144519726 144520054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144520238 144520822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144520911 144521478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGCACACGCTTGTGTTCTTGAGCACACGGCAGGTGCTGCAGTGCCAGCCAGCTGCCTGCCAGGCCCTGC
CCTTGCTGCCACGCGAACTCTTCCCCCTGCTGTTCAAGGTGGCCTTCATGGACAAGAAGACAGTGGTACT
GCGCGAGTTGGTACACACGTGGCCCTTCCCGCTGCTCAGTTTCCAGCAGCTGCTACAGGAGTGTGCCCAC
TGCAGCCGTGCCCTCCTGCAGGAGCGGCCTAGCACTGAGAGCATGCAGGCTGTTATCCTGGGGCTGACTG
CCCGGCTCCACACCTCAGAGCCTGGGGCCAGCACACAGCCCCTCTGCAGGAAGCATGCGCTGCGGGTGCT
GGACATGACGGGCCTCTTGGATGATGGTGTGGAACAGGATCCTGGCACCATGAGCATGTGGGACTGTACT
GCTGCCGTAGCTCGCACATGCATTGCCCAGCAGCAGGGTGGGGCCGCAGAGCCTGGGCCAGCCCCCATCC
CCGTGGAGGTGCGCGTGGACCTGCGGGTGAACCGGGCCTCCTATGCGTTCCTGCGGGAGGCACTCCGAAG
CAGCGTGGGCAGCCCGCTGCGGCTCTGCTGCCGGGACCTGCGAGCTGAGGACCTGCCCATGCGCAACACT
GTGGCCCTGCTGCAGCTTCTGGATGCAGGCTGCCTGCGCCGCGTGGACCTGCGCTTCAACAATCTGGGCC
TGCGCGGCCTGTCTGTGATCATCCCACACGTGGCCCGCTTCCAGCACCTGGCCAGCCTGCGGCTCCACTA
TGTGCATGGGGATTCAAGGCAGCCCTCCGTGGATGGCGAGGACAACTTCCGCTACTTCCTTGCCCAGATG
GGCCGCTTCACCTGTCTGCGTGAGCTCAGCATGGGCTCCTCTCTCCTTTCAGGGAGGCTGGACCAGCTGC
TCAGCACCCTGCAGAGCCCCCTGGAGAGCCTGGAGTTGGCCTTCTGTGCTCTGCTGCCTGAGGACCTACG
CTTCCTGGCACGGAGCCCACATGCTGCCCACCTCAAGAAGTTGGACCTGAGTGGTAACGACCTGTCTGGC
AGCCAGCTGGCACCCTTCCAGGGTCTGTTGCAGGCATCAGCAGCCACACTGTTGCATCTGGAGCTGACTG
AGTGTCAGCTCGCAGACACCCAGCTGTTGGCCACACTACCCATCCTGACTCAGTGCGCCAGTCTCCGGTA
CCTTGGCCTCTATGGCAACCCACTGTCCATGGCGGGCCTCAAGGAGCTGCTGCGGGACTCAGTGGCACAG
GCTGAGCTGCGTACTGTGGTGCACCCCTTCCCTGTGGACTGCTATGAGGGCTTGCCCTGGCCGCCGCCTG
CCTCTGTCCTGCTGGAGGCCTCCATCAATGAGGAGAAGTTTGCCCGCGTAGAAGCTGAGTTGCACCAGCT
GCTTCTAGCCTCAGGCCGTGCCCATGTGCTCTGGACCACGGACATCTACGGGCGACTGGCTGCGGACTAC
TTCAGCCTATGA

Translation (493 aa):
MHTLVFLSTRQVLQCQPAACQALPLLPRELFPLLFKVAFMDKKTVVLRELVHTWPFPLLSFQQLLQECAH
CSRALLQERPSTESMQAVILGLTARLHTSEPGASTQPLCRKHALRVLDMTGLLDDGVEQDPGTMSMWDCT
AAVARTCIAQQQGGAAEPGPAPIPVEVRVDLRVNRASYAFLREALRSSVGSPLRLCCRDLRAEDLPMRNT
VALLQLLDAGCLRRVDLRFNNLGLRGLSVIIPHVARFQHLASLRLHYVHGDSRQPSVDGEDNFRYFLAQM
GRFTCLRELSMGSSLLSGRLDQLLSTLQSPLESLELAFCALLPEDLRFLARSPHAAHLKKLDLSGNDLSG
SQLAPFQGLLQASAATLLHLELTECQLADTQLLATLPILTQCASLRYLGLYGNPLSMAGLKELLRDSVAQ
AELRTVVHPFPVDCYEGLPWPPPASVLLEASINEEKFARVEAELHQLLLASGRAHVLWTTDIYGRLAADY
FSL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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