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Report for CCDS64655.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64655.1 Public Homo sapiens 7 VOPP1 24 110 108 CCDS HistoryNCBI Gene:81552Re-query CCDS DB by CCDS ID:64655.1Re-query CCDS DB by GeneID:81552See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64655.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000625836.2 ENSP00000486983.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000625836.2Link to Ensembl Protein Viewer:ENSP00000486983.1Re-query CCDS DB by Nucleotide ID:ENST00000625836Re-query CCDS DB by Protein ID:ENSP00000486983
Original member Current member NCBI NM_001284283.2 NP_001271212.1 Accepted alive Link to Nucleotide Sequence:NM_001284283.2Link to Protein Sequence:NP_001271212.1Re-query CCDS DB by Nucleotide ID:NM_001284283Re-query CCDS DB by Protein ID:NP_001271212Link to BLAST:NP_001271212.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271212.1 169 Q96AW1-3 169 100% 0 0

Chromosomal Locations for CCDS 64655.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 55472855 55473045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55492282 55492418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55497613 55497690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55521072 55521130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55538613 55538657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (510 nt):
ATGCTCAGCGAAACTCTTGGGTATCTGTCTTCTGTGCTCTTGCAGTGCACAGAAGCCAAAAAGCATTGCT
GGTATTTCGAAGGACTCTATCCAACCTATTATATATGCCGCTCCTACGAGGACTGCTGTGGCTCCAGGTG
CTGTGTGCGGGCCCTCTCCATACAGAGGCTGTGGTACTTCTGGTTCCTTCTGATGATGGGCGTGCTTTTC
TGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCCCCGCCGCTGATCGAGGAGCCAGCCTTCA
ATGTGTCCTACACCAGGCAGCCCCCAAATCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCTATTACAC
CGACCCAGGAGGACCGGGGATGAACCCTGTCGGGAATTCCATGGCAATGGCTTTCCAGGTCCCACCCAAC
TCACCCCAGGGGAGTGTGGCCTGCCCGCCCCCTCCAGCCTACTGCAACACGCCTCCGCCCCCGTACGAAC
AGGTAGTGAAGGCCAAGTAG

Translation (169 aa):
MLSETLGYLSSVLLQCTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRLWYFWFLLMMGVLF
CCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPN
SPQGSVACPPPPAYCNTPPPPYEQVVKAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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