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Report for CCDS647.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
647.1 |
Public |
Homo sapiens |
1 |
SRSF11 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9295](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:647.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9295](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 647.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000370949.2 |
ENSP00000359987.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000370949.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000359987.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000370949](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000359987](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000370950.7 |
ENSP00000359988.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000370950.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000359988.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000370950](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000359988](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001350605.2 |
NP_001337534.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001350605.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001337534.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001350605](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001337534](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001337534.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001350606.2 |
NP_001337535.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001350606.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001337535.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001350606](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001337535](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001337535.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394406.1 |
NP_001381335.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394406.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381335.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394406](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381335](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381335.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_004768.5 |
NP_004759.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_004768.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_004759.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_004768](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_004759](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_004759.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 647.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1455 nt): ATGAGCAACACTACCGTCGTCCCCAGCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGCGGAGGTG GTGGTGGCGGCGGAGGCGGCGGCACCGAGGTAATCCAGGTGACTAATGTCTCCCCGAGCGCTAGCTCTGA GCAGATGCGGACTCTCTTCGGTTTCCTAGGCAAGATCGACGAACTGCGCCTCTTCCCGCCGGATGATTCG CCTTTGCCAGTCTCATCTCGTGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGCAGTTGTGGCACAGC ATCTGACAAACACTGTATTCGTTGACAGAGCTTTGATAGTCGTACCATATGCAGAAGGAGTTATTCCTGA TGAAGCTAAAGCTTTGTCTCTGTTGGCACCAGCTAATGCAGTGGCAGGTCTTCTGCCTGGTGGTGGACTC CTGCCTACTCCTAACCCACTTACCCAGATTGGCGCTGTTCCACTGGCTGCTTTGGGGGCTCCTACTCTTG ATCCTGCCCTTGCTGCACTTGGGCTTCCTGGAGCAAACTTGAACTCTCAGTCTCTTGCTGCAGATCAGTT GCTGAAGCTTATGAGTACTGTTGATCCCAAGTTGAATCATGTAGCTGCTGGTCTCGTTTCACCAAGTCTG AAATCGGATACCTCTAGTAAAGAAATAGAGGAAGCTATGAAAAGAGTACGAGAAGCACAGTCCCTAATTT CTGCTGCTATAGAACCAGATAAGAAAGAAGAAAAAAGAAGGCATTCAAGATCAAGATCACGTTCTAGGAG GAGGAGGACTCCCTCATCTTCTAGACACAGGCGGTCAAGAAGCAGATCGAGACGGCGGTCACATTCTAAG TCTAGGAGTCGGCGACGATCCAAAAGCCCAAGGCGGAGAAGATCTCATTCCAGAGAAAGAGGTAGAAGGT CAAGGAGCACATCAAAAACAAGAGACAAAAAGAAAGAAGACAAAGAAAAGAAACGTTCTAAAACACCACC AAAAAGTTACAGCACAGCCAGACGTTCTAGAAGTGCAAGCAGAGAGAGACGACGACGAAGAAGCAGGAGT GGCACAAGATCTCCTAAAAAGCCTCGGTCTCCTAAAAGAAAATTGTCCCGCTCACCATCCCCTAGGAGAC ATAAAAAGGAGAAGAAGAAAGATAAAGACAAAGAAAGAAGTAGGGATGAAAGAGAACGATCAACAAGCAA GAAGAAGAAGAGTAAAGATAAGGAAAAGGACCGGGAAAGAAAATCAGAGAGTGATAAAGATGTAAAACAG GTTACACGGGATTATGATGAAGAGGAACAGGGGTATGACAGTGAGAAAGAGAAAAAAGAAGAGAAGAAAC CAATAGAAACAGGTTCCCCTAAAACAAAGGAATGTTCTGTGGAAAAGGGAACTGGTGATTCACTAAGAGA ATCCAAAGTGAATGGGGATGATCATCATGAAGAAGACATGGATATGAGTGACTGA
Translation (484 aa): MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPPDDS PLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGL LPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSL KSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSK SRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRS GTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQ VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMDMSD
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