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Report for CCDS64803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64803.1 Public Homo sapiens 7 CHPF2 24 110 108 CCDS HistoryNCBI Gene:54480Re-query CCDS DB by CCDS ID:64803.1Re-query CCDS DB by GeneID:54480See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64803.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000495645.5 ENSP00000418914.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000495645.5Link to Ensembl Protein Viewer:ENSP00000418914.1Re-query CCDS DB by Nucleotide ID:ENST00000495645Re-query CCDS DB by Protein ID:ENSP00000418914
Original member Current member NCBI NM_001284295.2 NP_001271224.1 Accepted alive Link to Nucleotide Sequence:NM_001284295.2Link to Protein Sequence:NP_001271224.1Re-query CCDS DB by Nucleotide ID:NM_001284295Re-query CCDS DB by Protein ID:NP_001271224Link to BLAST:NP_001271224.1

Chromosomal Locations for CCDS 64803.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 151232765 151232814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151234086 151234274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151235048 151235612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151236408 151236590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151237374 151238681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2295 nt):
ATGCTGTCTCTGGCGCGGCCTCCGCTCCCGCCGACTGGCCTGAGAACGAGCCTGAGCCTCCTGCGGGTTT
CCTGGATCCAGGGGGAGGGAGAAGATCCCTGTGTCGAGGCTGTAGGGGAGCGAGGAGGGCCACAGAATCC
AGATTCCAGAGCTCGGCTAGACCAAAGTGATGAAGACTTCAAACCCCGGATTGTCCCCTACTACAGGGAC
CCCAACAAGCCCTACAAGAAGGTGCTCAGGACTCGGTACATCCAGACAGAGCTGGGCTCCCGTGAGCGGT
TGCTGGTGGCTGTCCTGACCTCCCGAGCTACACTGTCCACTTTGGCCGTGGCTGTGAACCGTACGGTGGC
CCATCACTTCCCTCGGTTACTCTACTTCACTGGGCAGCGGGGGGCCCGGGCTCCAGCAGGGATGCAGGTG
GTGTCTCATGGGGATGAGCGGCCCGCCTGGCTCATGTCAGAGACCCTGCGCCACCTTCACACACACTTTG
GGGCCGACTACGACTGGTTCTTCATCATGCAGGATGACACATATGTGCAGGCCCCCCGCCTGGCAGCCCT
TGCTGGCCACCTCAGCATCAACCAAGACCTGTACTTAGGCCGGGCAGAGGAGTTCATTGGCGCAGGCGAG
CAGGCCCGGTACTGTCATGGGGGCTTTGGCTACCTGTTGTCACGGAGTCTCCTGCTTCGTCTGCGGCCAC
ATCTGGATGGCTGCCGAGGAGACATTCTCAGTGCCCGTCCTGACGAGTGGCTTGGACGCTGCCTCATTGA
CTCTCTGGGCGTCGGCTGTGTCTCACAGCACCAGGGGCAGCAGTATCGCTCATTTGAACTGGCCAAAAAT
AGGGACCCTGAGAAGGAAGGGAGCTCGGCTTTCCTGAGTGCCTTCGCCGTGCACCCTGTCTCCGAAGGTA
CCCTCATGTACCGGCTCCACAAACGCTTCAGCGCTCTGGAGTTGGAGCGGGCTTACAGTGAAATAGAACA
ACTGCAGGCTCAGATCCGGAACCTGACCGTGCTGACCCCCGAAGGGGAGGCAGGGCTGAGCTGGCCCGTT
GGGCTCCCTGCTCCTTTCACACCACACTCTCGCTTTGAGGTGCTGGGCTGGGACTACTTCACAGAGCAGC
ACACCTTCTCCTGTGCAGATGGGGCTCCCAAGTGCCCACTACAGGGGGCTAGCAGGGCGGACGTGGGTGA
TGCGTTGGAGACTGCCCTGGAGCAGCTCAATCGGCGCTATCAGCCCCGCCTGCGCTTCCAGAAGCAGCGA
CTGCTCAACGGCTATCGGCGCTTCGACCCAGCACGGGGCATGGAGTACACCCTGGACCTGCTGTTGGAAT
GTGTGACACAGCGTGGGCACCGGCGGGCCCTGGCTCGCAGGGTCAGCCTGCTGCGGCCACTGAGCCGGGT
GGAAATCCTACCTATGCCCTATGTCACTGAGGCCACCCGAGTGCAGCTGGTGCTGCCACTCCTGGTGGCT
GAAGCTGCTGCAGCCCCGGCTTTCCTCGAGGCCTTTGCAGCCAATGTCCTGGAGCCACGAGAACATGCAT
TGCTCACCCTGTTGCTGGTCTACGGGCCACGAGAAGGTGGCCGTGGAGCTCCAGACCCATTTCTTGGGGT
GAAGGCTGCAGCAGCGGAGTTAGAGCGACGGTACCCTGGGACGAGGCTGGCCTGGCTCGCTGTGCGAGCA
GAGGCCCCTTCCCAGGTGCGACTCATGGACGTGGTCTCGAAGAAGCACCCTGTGGACACTCTCTTCTTCC
TTACCACCGTGTGGACAAGGCCTGGGCCCGAAGTCCTCAACCGCTGTCGCATGAATGCCATCTCTGGCTG
GCAGGCCTTCTTTCCAGTCCATTTCCAGGAGTTCAATCCTGCCCTGTCACCACAGAGATCACCCCCAGGG
CCCCCGGGGGCTGGCCCTGACCCCCCCTCCCCTCCTGGTGCTGACCCCTCCCGGGGGGCTCCTATAGGGG
GGAGATTTGACCGGCAGGCTTCTGCGGAGGGCTGCTTCTACAACGCTGACTACCTGGCGGCCCGAGCCCG
GCTGGCAGGTGAACTGGCAGGCCAGGAAGAGGAGGAAGCCCTGGAGGGGCTGGAGGTGATGGATGTTTTC
CTCCGGTTCTCAGGGCTCCACCTCTTTCGGGCCGTAGAGCCAGGGCTGGTGCAGAAGTTCTCCCTGCGAG
ACTGCAGCCCACGGCTCAGTGAAGAACTCTACCACCGCTGCCGCCTCAGCAACCTGGAGGGGCTAGGGGG
CCGTGCCCAGCTGGCTATGGCTCTCTTTGAGCAGGAGCAGGCCAATAGCACTTAG

Translation (764 aa):
MLSLARPPLPPTGLRTSLSLLRVSWIQGEGEDPCVEAVGERGGPQNPDSRARLDQSDEDFKPRIVPYYRD
PNKPYKKVLRTRYIQTELGSRERLLVAVLTSRATLSTLAVAVNRTVAHHFPRLLYFTGQRGARAPAGMQV
VSHGDERPAWLMSETLRHLHTHFGADYDWFFIMQDDTYVQAPRLAALAGHLSINQDLYLGRAEEFIGAGE
QARYCHGGFGYLLSRSLLLRLRPHLDGCRGDILSARPDEWLGRCLIDSLGVGCVSQHQGQQYRSFELAKN
RDPEKEGSSAFLSAFAVHPVSEGTLMYRLHKRFSALELERAYSEIEQLQAQIRNLTVLTPEGEAGLSWPV
GLPAPFTPHSRFEVLGWDYFTEQHTFSCADGAPKCPLQGASRADVGDALETALEQLNRRYQPRLRFQKQR
LLNGYRRFDPARGMEYTLDLLLECVTQRGHRRALARRVSLLRPLSRVEILPMPYVTEATRVQLVLPLLVA
EAAAAPAFLEAFAANVLEPREHALLTLLLVYGPREGGRGAPDPFLGVKAAAAELERRYPGTRLAWLAVRA
EAPSQVRLMDVVSKKHPVDTLFFLTTVWTRPGPEVLNRCRMNAISGWQAFFPVHFQEFNPALSPQRSPPG
PPGAGPDPPSPPGADPSRGAPIGGRFDRQASAEGCFYNADYLAARARLAGELAGQEEEEALEGLEVMDVF
LRFSGLHLFRAVEPGLVQKFSLRDCSPRLSEELYHRCRLSNLEGLGGRAQLAMALFEQEQANST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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