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Report for CCDS64965.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64965.1 Public Homo sapiens 8 NTAQ1 24 110 108 CCDS HistoryNCBI Gene:55093Re-query CCDS DB by CCDS ID:64965.1Re-query CCDS DB by GeneID:55093See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64965.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523984.5 ENSP00000430427.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523984.5Link to Ensembl Protein Viewer:ENSP00000430427.1Re-query CCDS DB by Nucleotide ID:ENST00000523984Re-query CCDS DB by Protein ID:ENSP00000430427
Original member Current member EBI ENST00000524254.5 ENSP00000497832.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524254.5Link to Ensembl Protein Viewer:ENSP00000497832.1Re-query CCDS DB by Nucleotide ID:ENST00000524254Re-query CCDS DB by Protein ID:ENSP00000497832
Original member Current member NCBI NM_001283024.1 NP_001269953.1 Accepted alive Link to Nucleotide Sequence:NM_001283024.1Link to Protein Sequence:NP_001269953.1Re-query CCDS DB by Nucleotide ID:NM_001283024Re-query CCDS DB by Protein ID:NP_001269953Link to BLAST:NP_001269953.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269953.1 145 Q96HA8-2 145 100% 0 0

Chromosomal Locations for CCDS 64965.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123428021 123428023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123429983 123430033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123436453 123436601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123437210 123437334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123441306 123441415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGATACCTATCTGGAAACAACAGGCGAGACCTGGAGATGGACCTGTGATCTGGGATTACCATGTTGTTT
TGCTTCATGTTTCAAGTGGAGGACAGAACTTCATTTATGATCTCGATACTGTCTTGCCATTTCCCTGCCT
CTTTGACACTTATGTAGAAGATGCCTTTAAGTCTGATGATGACATTCACCCACAGTTTAGGAGGAAATTT
AGAGTGATCCGTGCAGATTCATATTTGAAGAACTTTGCTTCTGACCGATCTCACATGAAAGACTCCAGTG
GGAATTGGAGAGAGCCTCCGCCGCCATATCCCTGCATTGAGACTGGAGATTCCAAAATGAACCTGAACGA
TTTCATCAGTATGGATCCCAAGGTAGGATGGGGCGCCGTCTACACACTATCCGAATTTACACATCGGTTT
GGCAGTAAAAACTGCTGA

Translation (145 aa):
MIPIWKQQARPGDGPVIWDYHVVLLHVSSGGQNFIYDLDTVLPFPCLFDTYVEDAFKSDDDIHPQFRRKF
RVIRADSYLKNFASDRSHMKDSSGNWREPPPPYPCIETGDSKMNLNDFISMDPKVGWGAVYTLSEFTHRF
GSKNC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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