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Report for CCDS64968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64968.1 Public Homo sapiens 8 MTSS1 24 110 108 CCDS HistoryNCBI Gene:9788Re-query CCDS DB by CCDS ID:64968.1Re-query CCDS DB by GeneID:9788See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378017.7 ENSP00000367256.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378017.7Link to Ensembl Protein Viewer:ENSP00000367256.3Re-query CCDS DB by Nucleotide ID:ENST00000378017Re-query CCDS DB by Protein ID:ENSP00000367256
Original member Current member NCBI NM_001282974.2 NP_001269903.1 Accepted alive Link to Nucleotide Sequence:NM_001282974.2Link to Protein Sequence:NP_001269903.1Re-query CCDS DB by Nucleotide ID:NM_001282974Re-query CCDS DB by Protein ID:NP_001269903Link to BLAST:NP_001269903.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269903.1 730 O43312-4 730 100% 0 0

Chromosomal Locations for CCDS 64968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124552992 124553692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124555742 124555904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124556232 124556405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124558713 124558832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124562782 124562992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124565662 124565759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124567071 124567178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124568379 124568536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124585087 124585161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124589620 124589711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124591151 124591235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124699526 124699599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124704130 124704191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124727884 124727955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2193 nt):
ATGGAGGCTGTGATTGAGAAGGAATGCAGCGCGCTCGGAGGCCTCTTCCAGACCATCATCAGCGACATGA
AGGGGAGCTATCCAGTTTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGACAAC
AGTAGTAGCAGCAGCTGCCTTCTTGGACGCCTTTCAGAAAGTGGCTGACATGGCCACCAACACACGTGGT
GGGACCAGGGAGATTGGATCTGCTCTCACCAGGATGTGCATGAGGCACAGAAGCATTGAAGCCAAGCTGA
GGCAGTTTTCGAGCGCTTTAATTGATTGTCTGATAAACCCACTTCAAGAACAGATGGAAGAATGGAAGAA
AGTGGCCAACCAGCTGGATAAAGACCACGCAAAAGAATATAAGAAAGCCCGCCAAGAGATAAAAAAGAAG
TCCTCGGATACGCTGAAACTGCAGAAGAAAGCAAAAAAAGGGAGAGGTGATATCCAGCCTCAGTTGGACA
GTGCTCTCCAAGATGTCAATGATAAGTATCTCTTATTGGAAGAAACAGAAAAGCAGGCTGTCCGGAAGGC
TTTGATTGAAGAACGTGGCCGATTCTGTACCTTCATCTCTATGCTGCGGCCAGTGATTGAAGAAGAAATC
TCAATGCTAGGGGAAATAACCCACCTTCAGACCATCTCGGAAGATCTAAAAAGCCTGACCATGGACCCTC
ACAAACTGCCCTCCTCAAGTGAACAGGTGATTCTGGACTTGAAAGGTTCTGATTACAGCTGGTCGTATCA
GACGCCACCCTCTTCCCCCAGCACCACCATGTCCAGAAAGTCCAGTGTCTGCAGCAGCCTGAACAGTGTC
AACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAGCTCACATTACCGCTACCGCAGCT
CCAACCTGGCCCAGCAGGCTCCTGTGAGGCTGTCCAGCGTGTCCTCCCATGACTCAGGATTCATATCCCA
GGATGCCTTCCAGTCCAAGTCACCATCCCCCATGCCGCCAGAGGCCCCCAACCAGAACTCGTCCAGCTCG
GCCTCCTCCGAAGCCTCGGAAACCTGCCAGTCAGTGAGCGAGTGCAGCTCCCCCACCTCTGTCAGCTCGG
GCTCCACCATGGGTGCCTGGGTGTCCACAGAGAAGGACTGGGCTAAGCCTGGGCCCTATGACCAGCCTCT
GGTGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGGGAGGACCCACTACCGCC
AGCGGCCCACCTGCAGCAGCTGAGGAGGCTCAGAGACCACGGAGCATGACTGTATCGGCTGCCACCAGGC
CTGGTGAGGAGATGGAGGCTTGTGAGGAGCTGGCCCTGGCCCTGTCTCGGGGCCTGCAGCTGGACACCCA
GAGGAGCAGCCGGGACTCGCTTCAGTGCTCCAGCGGCTACAGCACCCAGACAACCACCCCCTGCTGCTCT
GAGGACACCATCCCTTCCCAAGTTTCAGATTATGATTATTTCTCTGTAAGTGGTGACCAGGAGGCAGATC
AGCAGGAGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCGACATCAGCCAGTCCTACCGACGGATGTT
CCAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTGCTATGGTCACTCCAGGG
GTTGCAACTATCCGACGGACCCCTTCCACCAAGCCTTCTGTCCGCCGGGGAACCATTGGAGCTGGTCCCA
TCCCCATCAAGACACCCGTGATCCCTGTCAAGACCCCAACCGTCCCAGACCTCCCAGGGGTGTTGCCAGC
CCCTCCAGATGGGCCAGAAGAGCGGGGGGAGCACAGCCCTGAGTCGCCATCTGTGGGTGAGGGCCCCCAA
GGTGTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCCTCCACTTCCAGGCCCGA
AGCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAAGACCAGGAACGGGAACC
CCCAAGTGCCACTGTCTCCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATACT
CCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGAAACTGAAGAAGACCACGACAAACGATC
GCTCAGCCCCTCGCTTTTCTTAG

Translation (730 aa):
MEAVIEKECSALGGLFQTIISDMKGSYPVWEDFINKAGKLQSQLRTTVVAAAAFLDAFQKVADMATNTRG
GTREIGSALTRMCMRHRSIEAKLRQFSSALIDCLINPLQEQMEEWKKVANQLDKDHAKEYKKARQEIKKK
SSDTLKLQKKAKKGRGDIQPQLDSALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISMLRPVIEEEI
SMLGEITHLQTISEDLKSLTMDPHKLPSSSEQVILDLKGSDYSWSYQTPPSSPSTTMSRKSSVCSSLNSV
NSSDSRSSGSHSHSPSSHYRYRSSNLAQQAPVRLSSVSSHDSGFISQDAFQSKSPSPMPPEAPNQNSSSS
ASSEASETCQSVSECSSPTSVSSGSTMGAWVSTEKDWAKPGPYDQPLVNTLQRRKEKREPDPNGGGPTTA
SGPPAAAEEAQRPRSMTVSAATRPGEEMEACEELALALSRGLQLDTQRSSRDSLQCSSGYSTQTTTPCCS
EDTIPSQVSDYDYFSVSGDQEADQQEFDKSSTIPRNSDISQSYRRMFQAKRPASTAGLPTTLGPAMVTPG
VATIRRTPSTKPSVRRGTIGAGPIPIKTPVIPVKTPTVPDLPGVLPAPPDGPEERGEHSPESPSVGEGPQ
GVTSMPSSMWSGQASVNPPLPGPKPSIPEEHRQAIPESEAEDQEREPPSATVSPGQIPESDPADLSPRDT
PQGEDMLNAIRRGVKLKKTTTNDRSAPRFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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