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Report for CCDS6544.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6544.1 Public Homo sapiens 9 NOL6 24 110 108 CCDS HistoryNCBI Gene:65083Re-query CCDS DB by CCDS ID:6544.1Re-query CCDS DB by GeneID:65083See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6544.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000353159.6 ENSP00000313978.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000353159.6Link to Ensembl Protein Viewer:ENSP00000313978.4Re-query CCDS DB by Nucleotide ID:ENST00000353159Re-query CCDS DB by Protein ID:ENSP00000313978
Original member Current member NCBI NM_139235.4 NP_631981.2 Accepted alive Link to Nucleotide Sequence:NM_139235.4Link to Protein Sequence:NP_631981.2Re-query CCDS DB by Nucleotide ID:NM_139235Re-query CCDS DB by Protein ID:NP_631981Link to BLAST:NP_631981.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_631981.2 699 Q9H6R4-3 699 100% 0 0

Chromosomal Locations for CCDS 6544.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 33462664 33462813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33466912 33466987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33467114 33467262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33467394 33467516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33467691 33467868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33468030 33468145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33468321 33468422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33468508 33468566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33468752 33468872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33468958 33469121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33469207 33469341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33469499 33469667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33470012 33470191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33472004 33472120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33472206 33472412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 33473789 33473842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2100 nt):
ATGGGGCCGGCGCCAGCTGGAGAGCAGCTTCGCGGAGCGACTGGAGAGCCAGAGGTGATGGAACCAGCCC
TGGAAGGCACAGGCAAAGAGGGGAAGAAAGCATCCTCCAGGAAGCGTACATTGGCTGAACCTCCAGCGAA
GGGCCTCCTGCAGCCAGTGAAGCTCAGCAGGGCAGAACTGTACAAGGAGCCTACCAATGAGGAGCTTAAT
CGCCTTCGGGAGACTGAGATCTTGTTCCACTCCAGCTTGCTTCGTTTACAGGTAGAGGAGCTACTAAAGG
AAGTAAGGCTGTCAGAGAAGAAGAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGT
GAGGGTGCCCTCAGTCCCTGAGACAGAGCTCACTGACCAGGCATGGCTCCCAGCTGGGGTTCGAGTGCCC
CTCCACCAAGTGCCCTATGCCGTGAAGGGCTGTTTCCGCTTCCTGCCCCCAGCCCAGGTTACTGTTGTGG
GCAGCTACCTTCTGGGCACCTGCATCCGACCAGACATCAATGTGGATGTGGCACTGACCATGCCCAGGGA
AATCCTACAGGACAAGGACGGGCTGAACCAGCGCTACTTCCGCAAGCGTGCCCTCTACCTGGCCCACTTG
GCTCACCACCTGGCCCAGGACCCCCTCTTTGGCAGTGTTTGCTTCTCCTACACAAATGGCTGCCACCTGA
AACCCTCACTGTTGCTGCGGCCGCGTGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCC
TCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGA
GGGCAGAGTCCTGCAGGGGATGGTAGCCCAGAGCCTCCTACCCCCCGCTATAACACATGGGTCCTGCAAG
ATACAGTTCTCGAGTCCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGG
CGTGGCACTTCTGAAGGTCTGGCTGCGGCAGCGGGAGCTGGACAAGGGCCAGGGTGGGTTTACTGGGTTC
CTTGTCTCCATGCTGGTTGTCTTCCTTGTGTCTACACGCAAGATCCATACCACCATGAGTGGCTACCAGG
TCCTGAGAAGTGTCTTGCAGTTTCTGGCCACTACAGACCTGACAGTCAACGGGATCAGTTTATGTCTCAG
CTCAGATCCCTCTTTGCCGGCCCTGGCTGACTTCCACCAGGCCTTCTCCGTTGTCTTCCTGGATTCCTCA
GGCCATCTCAACCTCTGTGCTGATGTCACTGCCTCTACTTACCACCAGGTACAGCATGAGGCACGGCTGT
CTATGATGTTGCTGGACAGCAGAGCTGACGACGGGTTCCACCTGCTGTTGATGACTCCCAAACCCATGAT
CCGGGCTTTTGACCATGTCCTGCATCTCCGTCCACTGAGTCGCCTGCAGGCAGCGTGCCACCGGCTGAAG
CTCTGGCCAGAGCTGCAGGACAATGGTGGGGACTATGTCTCAGCTGCTTTGGGCCCCCTGACCACCCTCC
TGGAGCAGGGCCTGGGGGCTCGGCTGAACCTGCTGGCTCACTCTCGACCCCCAGTCCCAGAGTGGGACAT
CAGCCAAGATCCACCAAAGCACAAAGACTCTGGGACCCTGACCCTGGGACTCCTTCTCCGGCCTGAGGGA
CTGACCAGCGTCCTTGAGCTGGGTCCAGAGGCAGACCAGCCTGAGGCTGCTAAATTCCGCCAGTTCTGGG
GATCCCGCTCGGAGCTTCGGCGTTTCCAGGACGGAGCCATTCGGGAAGCTGTGGTCTGGGAGGCAGCCTC
TATGTCCCAGAAGCGCCTTATTCCCCACCAGGTGGTCACCCACCTCTTGGCACTCCATGCTGACATCCCA
GAAACCTGTGTCCACTATGTGGGGGGCCCCCTGGATGCACTTATCCAAGGCCTGAAAGAGGCCTCCAGCA
CAAAGGGGCGCATGGTGATGTCTCGAGGTGGGGAGCTAGTAATGGTGCCCAATGTTGAAGCAATCCTGGA
GGACTTTGCTGTGCTGGGTGAAGGCCTGGTGCAGACTGTGGAGGCCCGAAGTGAGAGGTGGACTGTGTGA

Translation (699 aa):
MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAELYKEPTNEELN
RLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVPSVPETELTDQAWLPAGVRVP
LHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDVALTMPREILQDKDGLNQRYFRKRALYLAHL
AHHLAQDPLFGSVCFSYTNGCHLKPSLLLRPRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYR
GQSPAGDGSPEPPTPRYNTWVLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGF
LVSMLVVFLVSTRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS
GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLSRLQAACHRLK
LWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQDPPKHKDSGTLTLGLLLRPEG
LTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREAVVWEAASMSQKRLIPHQVVTHLLALHADIP
ETCVHYVGGPLDALIQGLKEASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTVEARSERWTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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