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Report for CCDS65592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65592.1 Public Homo sapiens 1 CNN3 24 110 108 CCDS HistoryNCBI Gene:1266Re-query CCDS DB by CCDS ID:65592.1Re-query CCDS DB by GeneID:1266See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 65592.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000545882.5 ENSP00000440081.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545882.5Link to Ensembl Protein Viewer:ENSP00000440081.1Re-query CCDS DB by Nucleotide ID:ENST00000545882Re-query CCDS DB by Protein ID:ENSP00000440081
Original member Current member NCBI NM_001286056.2 NP_001272985.1 Accepted alive Link to Nucleotide Sequence:NM_001286056.2Link to Protein Sequence:NP_001272985.1Re-query CCDS DB by Nucleotide ID:NM_001286056Re-query CCDS DB by Protein ID:NP_001272985Link to BLAST:NP_001272985.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001272985.1 288 Q15417-2 288 100% 0 0

Chromosomal Locations for CCDS 65592.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 94897742 94898083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 94899371 94899517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 94901669 94901785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 94902121 94902258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 94903122 94903188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 94903403 94903458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGAGCATTGGCCCCAACTTCCAGCTGGGCTTAAAGGATGGCATCATCCTCTGCGAACTTATAAACAAGC
TACAGCCAGGCTCAGTGAAGAAGGTCAACGAGTCCTCACTGAACTGGCCTCAGTTGGAGAATATTGGCAA
CTTTATTAAAGCTATTCAGGCTTATGGTATGAAGCCACATGACATATTCGAAGCAAATGATCTTTTTGAG
AATGGAAACATGACCCAGGTTCAGACTACTCTGGTGGCTCTAGCAGGTCTGGCTAAAACAAAAGGATTCC
ATACAACCATTGACATTGGAGTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGAAAATTAAA
AGCTGGCCAAAGTGTAATTGGTCTGCAGATGGGAACCAACAAATGTGCCAGCCAGGCAGGTATGACAGCT
TACGGGACTAGGAGGCATCTTTATGATCCCAAAATGCAAACTGACAAACCTTTTGACCAGACCACAATTA
GTCTGCAGATGGGCACTAATAAAGGAGCCAGCCAGGCAGGGATGTTAGCACCAGGTACCAGAAGAGACAT
CTATGATCAGAAGCTAACATTACAGCCGGTGGACAACTCGACAATTTCCCTACAGATGGGTACCAACAAA
GTTGCTTCCCAGAAAGGAATGAGTGTGTATGGGCTTGGGCGGCAAGTATATGATCCCAAATACTGTGCTG
CTCCTACAGAACCTGTCATTCACAACGGAAGCCAAGGAACAGGAACAAATGGTTCGGAAATCAGTGATAG
TGATTATCAGGCAGAATACCCTGATGAGTATCATGGCGAGTACCAGGATGACTACCCCAGAGATTACCAA
TATAGCGACCAAGGCATTGATTATTAG

Translation (288 aa):
MSIGPNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFE
NGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTA
YGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNK
VASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQDDYPRDYQ
YSDQGIDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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